Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RNU6-882P-201ENST00000391025 103 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 RPL21P90-201ENST00000415692 466 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 AL138785.1-201ENST00000425821 331 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 AL133396.1-201ENST00000432048 687 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 AC073910.1-201ENST00000445047 438 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 RPL17P19-201ENST00000489069 552 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 SLC25A15P5-201ENST00000508033 253 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 SNORA40.14-201ENST00000516543 86 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 RNU6-914P-201ENST00000516749 109 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 RNU6-388P-201ENST00000517012 105 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 RNU6-389P-201ENST00000517048 105 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 RPL23AP87-202ENST00000573039 466 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 RNU6-85P-201ENST00000605989 107 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 AP005432.2-201ENST00000608162 586 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 AL591516.1-201ENST00000611326 274 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 HMGB1P24-202ENST00000615653 685 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 MIR8069-1-201ENST00000616627 86 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 MIR8069-2-201ENST00000621412 86 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 MIR8062-201ENST00000621515 85 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 AL031601.2-202ENST00000622650 282 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 CU639417.4-201ENST00000623928 207 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 SNORD14.1-201ENST00000365609 90 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 Y_RNA.485-201ENST00000384395 102 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 RNU6-713P-201ENST00000384761 107 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 HSPE1P8-201ENST00000406997 288 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 U3.35-201ENST00000408405 208 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 REREP1Y-201ENST00000422655 198 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 REREP2Y-201ENST00000439103 200 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 RPS24P13-201ENST00000442520 397 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 FTH1P25-201ENST00000447665 469 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 AL445433.1-201ENST00000457507 257 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 FTH1P2-201ENST00000466086 412 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 AC008571.1-201ENST00000467232 300 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 RPL7P51-201ENST00000490532 749 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 AC104109.1-201ENST00000498563 436 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 RPS4XP20-201ENST00000505751 772 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 RNU6-408P-201ENST00000515910 100 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 RNU2-53P-201ENST00000516257 147 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 SNORA31.22-201ENST00000517204 135 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 AC126177.3-201ENST00000551839 688 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 BNIP3P5-201ENST00000562290 498 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 MIR548AC-201ENST00000585049 88 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 OR1M4P-201ENST00000589199 287 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 RNF138P2-201ENST00000603490 592 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 MTND5P7-201ENST00000413558 1798 ntBASIC4.49□□□□□ -1.69
SHISA3A0PJX4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHISA3A0PJX4 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AL139811.1-201ENST00000424779 2299 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 241.2 ms