Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AC109464.2-201ENST00000510242 943 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 AC026726.1-201ENST00000512859 601 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 SNORA18.6-201ENST00000516792 115 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 RNU2-46P-201ENST00000517038 113 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 AC123904.3-201ENST00000547218 814 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 MIR3682-201ENST00000581338 84 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 AC103987.3-201ENST00000582071 292 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 BDH2P1-201ENST00000602288 736 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 MIR4275-201ENST00000636486 87 ntBASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HCN3Q9P1Z3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HCN3Q9P1Z3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
HCN3Q9P1Z3 AL672296.1-201ENST00000427780 2158 ntBASIC3.65□□□□□ -1.82
HCN3Q9P1Z3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 DEFB108F-201ENST00000344638 222 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 Y_RNA.194-201ENST00000363985 102 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 RNU1-39P-201ENST00000383897 165 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 MIR134-201ENST00000385258 73 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 RPL32P23-201ENST00000397237 405 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 DEFB108C-201ENST00000400154 252 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 RNU2-62P-201ENST00000410868 191 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 RNU6-195P-201ENST00000411352 109 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 DLGAP5P1-201ENST00000430307 464 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 AC087650.1-201ENST00000431445 468 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 AC073614.1-201ENST00000438690 650 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 MTND2P24-201ENST00000453434 806 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 AC008481.1-201ENST00000463278 396 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 RAP1BP2-201ENST00000478270 544 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 HSPE1P6-201ENST00000479457 291 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 AL049874.1-201ENST00000489560 388 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 RNU6-64P-201ENST00000517119 105 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 RNU1-45P-201ENST00000517191 141 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 IGKV2D-19-201ENST00000523346 262 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 CYCSP30-201ENST00000546447 172 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 OR4H12P-201ENST00000556269 907 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 AC099489.2-201ENST00000574976 260 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 MIR4644-201ENST00000579929 84 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 AC105224.1-201ENST00000587055 421 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 AP000254.1-201ENST00000609934 520 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 AC139792.2-201ENST00000624218 587 ntBASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HCN3Q9P1Z3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 OR5H15-201ENST00000383696 930 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 RNU6-348P-201ENST00000384386 107 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 RN7SKP202-201ENST00000410439 330 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 RNU2-8P-201ENST00000410727 190 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AC127391.1-201ENST00000411737 98 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 KCTD9P3-201ENST00000434597 1169 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 MTCO3P45-201ENST00000443036 613 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms