Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 RNU5E-1-201ENST00000362477 120 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 SNORA71.2-201ENST00000364941 134 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 SNORA20.2-201ENST00000383922 131 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 Y_RNA.445-201ENST00000384168 102 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 MT-TR-201ENST00000387439 65 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CD248Q9HCU0 AL356057.3-201ENST00000402607 340 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 RNU2-9P-201ENST00000410194 145 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 NUP35P1-201ENST00000422734 947 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 SRIP2-201ENST00000428470 166 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.64□□□□□ -1.67
CD248Q9HCU0 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.64□□□□□ -1.67
CD248Q9HCU0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.64□□□□□ -1.67
CD248Q9HCU0 MTND5P22-201ENST00000458380 195 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.64□□□□□ -1.67
CD248Q9HCU0 RPL38P4-201ENST00000502376 214 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.64□□□□□ -1.67
CD248Q9HCU0 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CD248Q9HCU0 RN7SKP283-201ENST00000517197 270 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 HMGB1P6-201ENST00000569046 646 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 AC015912.2-201ENST00000571053 181 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 MIR3939-201ENST00000582614 106 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 7SK.7-201ENST00000603504 247 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 Z84480.1-201ENST00000605131 311 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 AC021646.1-201ENST00000605469 484 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 BX664608.1-201ENST00000610519 487 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 uc_338.32-201ENST00000615087 172 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.64□□□□□ -1.67
CD248Q9HCU0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CD248Q9HCU0 AC090337.1-201ENST00000579651 2074 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CD248Q9HCU0 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
CD248Q9HCU0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CD248Q9HCU0 OR4G1P-203ENST00000641984 1631 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.64□□□□□ -1.67
CD248Q9HCU0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
CD248Q9HCU0 MTND4P14-201ENST00000435799 1354 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 LARP1BP1-201ENST00000506036 1359 ntBASIC4.64□□□□□ -1.67
CD248Q9HCU0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD248Q9HCU0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD248Q9HCU0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD248Q9HCU0 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 RNU6-1309P-201ENST00000363305 108 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 Y_RNA.126-201ENST00000363382 111 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 RNU6-1318P-201ENST00000365389 103 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 RNU6-331P-201ENST00000384724 107 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 SDHCP2-201ENST00000398565 501 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 HMGB1P17-201ENST00000403495 628 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 AL136116.1-201ENST00000403591 381 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 BTBD10P2-201ENST00000404779 676 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 AC019097.1-201ENST00000424783 735 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 AL358176.2-201ENST00000425769 204 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 PPP1R2P5-201ENST00000457256 603 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 RPL21P126-201ENST00000470049 478 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 RPL23AP65-201ENST00000475608 468 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 EIF4EP3-201ENST00000498782 656 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CD248Q9HCU0 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 RNU6-794P-201ENST00000517261 64 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 AC018630.1-201ENST00000541376 925 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 FRG2DP-202ENST00000566967 323 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 XIAPP1-201ENST00000603162 600 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 DPPA3P3-201ENST00000603842 430 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 AC080078.3-201ENST00000605407 463 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 AL354950.2-201ENST00000617939 290 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 AP005019.3-201ENST00000620418 560 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 AC119674.1-207ENST00000641355 633 ntBASIC4.63□□□□□ -1.67
CD248Q9HCU0 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD248Q9HCU0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD248Q9HCU0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD248Q9HCU0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CD248Q9HCU0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CD248Q9HCU0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.62□□□□□ -1.67
CD248Q9HCU0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CD248Q9HCU0 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
CD248Q9HCU0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms