Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM55Q9BYV6 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 AC010733.2-201ENST00000589496 5702 ntBASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 AC073544.1-201ENST00000600110 1595 ntBASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 RNA5SP28-201ENST00000363841 119 ntBASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 MIR192-201ENST00000384915 110 ntBASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 EEF1A1P40-201ENST00000412883 573 ntBASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 AC092809.3-201ENST00000415453 231 ntBASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 RN7SL41P-201ENST00000476144 297 ntBASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 AC010350.1-201ENST00000504908 231 ntBASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 Y_RNA.689-201ENST00000516589 107 ntBASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 RN7SKP260-201ENST00000516907 149 ntBASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 AL137161.1-201ENST00000532231 390 ntBASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 AC006270.2-201ENST00000578523 652 ntBASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 AC005261.5-201ENST00000596280 355 ntBASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 AC008745.1-201ENST00000604064 271 ntBASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 AL158032.1-201ENST00000605401 106 ntBASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 AL731566.2-201ENST00000618971 317 ntBASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 MIR7703-201ENST00000620784 77 ntBASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 AC112200.1-201ENST00000625015 234 ntBASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 MTND5P42-201ENST00000637720 498 ntBASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 AC099654.2-201ENST00000433031 1980 ntBASIC4.8□□□□□ -1.64
TRIM55Q9BYV6 AL442639.1-201ENST00000625030 1899 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 OR4G2P-202ENST00000641004 1759 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 Y_RNA.263-201ENST00000364659 114 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 RNA5SP428-201ENST00000365129 132 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 MIR514A1-201ENST00000385133 98 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 RNU6-817P-201ENST00000391083 104 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 RNU6-1148P-201ENST00000410992 104 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 RAB28P1-201ENST00000411517 641 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 AL590139.1-201ENST00000416267 400 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 KCTD9P3-201ENST00000434597 1169 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 PRPF38AP2-201ENST00000438179 851 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 MTND4LP16-201ENST00000440828 295 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 AC011753.3-201ENST00000443436 406 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 RPL7P12-201ENST00000446719 750 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 AC140172.1-201ENST00000502928 141 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 CCDC34P1-201ENST00000507441 517 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 Y_RNA.665-201ENST00000516177 98 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 RNU6-1314P-201ENST00000517139 104 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 BTF3P12-201ENST00000519620 469 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 MTND4P7-201ENST00000523876 130 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 AC243972.3-201ENST00000539655 198 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 AC022968.1-201ENST00000567372 442 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 SNORA74C-1-201ENST00000580726 201 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 AL117336.2-201ENST00000602435 335 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 C8orf59P2-201ENST00000603441 271 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 AC105254.2-201ENST00000603636 436 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 AL670379.4-201ENST00000605279 254 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 AC091979.2-201ENST00000607514 214 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 AC019206.1-201ENST00000621938 425 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 AP000346.3-201ENST00000622821 210 ntBASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM55Q9BYV6 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms