Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 RNU6-522P-201ENST00000364497 107 ntBASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 RNY4P36-201ENST00000391116 96 ntBASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 AL136372.1-201ENST00000403060 228 ntBASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 AL359643.1-201ENST00000404109 423 ntBASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 AL359634.1-202ENST00000404721 284 ntBASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 RNU6-628P-201ENST00000410675 107 ntBASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 VN1R36P-201ENST00000414936 291 ntBASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 AC006946.1-201ENST00000429106 328 ntBASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 RPS26P2-201ENST00000440331 348 ntBASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 RPL23AP43-201ENST00000446445 471 ntBASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 SNORD121B-201ENST00000458838 81 ntBASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 HMGB1P21-201ENST00000502313 581 ntBASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 RPL39P5-202ENST00000512505 151 ntBASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 AC023632.4-201ENST00000517783 191 ntBASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 MTND4P7-201ENST00000523876 130 ntBASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 DEFB109D-201ENST00000529497 240 ntBASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 MIR4703-201ENST00000577728 79 ntBASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 DPPA3P3-201ENST00000603842 430 ntBASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 AC113194.1-201ENST00000606037 500 ntBASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 AL627309.6-201ENST00000606857 840 ntBASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
PRPF40BQ6NWY9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PRPF40BQ6NWY9 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 AL022322.2-201ENST00000624072 20397 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 SNORA33.2-201ENST00000365413 134 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 MIR670-201ENST00000390142 98 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 RPL5P18-201ENST00000406671 891 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 RPS15AP40-201ENST00000419621 391 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 AL353597.2-202ENST00000434901 373 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 AL353691.1-201ENST00000451332 387 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 DHFRP3-201ENST00000455595 559 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 AC012181.1-201ENST00000479895 423 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 RN7SKP46-201ENST00000515942 234 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 RNU6-864P-201ENST00000516256 108 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 Y_RNA.682-201ENST00000516457 100 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 RNU6-1038P-201ENST00000516516 104 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 AL133271.1-201ENST00000538229 291 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 MIR4444-1-201ENST00000581696 74 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 MIR4444-2-201ENST00000584390 74 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 SNRPGP17-201ENST00000603780 214 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 AL451044.1-201ENST00000604867 238 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 AC016925.2-201ENST00000605108 242 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 AL592436.1-201ENST00000605135 558 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 AL391684.1-202ENST00000641293 1636 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 MTCO1P12-201ENST00000414273 1543 ntBASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.58□□□□□ -1.52
PRPF40BQ6NWY9 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 RNU6-511P-201ENST00000363496 107 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 Y_RNA.144-201ENST00000363521 113 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 Y_RNA.145-201ENST00000363527 102 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms