Protein–RNA interactions for Protein: P39748

FEN1, Flap endonuclease 1, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FEN1P39748 MIR1305-201ENST00000408300 86 ntBASIC3.13□□□□□ -1.91
FEN1P39748 RNA5SP107-201ENST00000411358 122 ntBASIC3.13□□□□□ -1.91
FEN1P39748 HMGB1P11-201ENST00000413899 637 ntBASIC3.13□□□□□ -1.91
FEN1P39748 AC093578.1-201ENST00000415219 368 ntBASIC3.13□□□□□ -1.91
FEN1P39748 OR1AA1P-201ENST00000419597 916 ntBASIC3.13□□□□□ -1.91
FEN1P39748 AL137014.1-201ENST00000420490 1226 ntBASIC3.13□□□□□ -1.91
FEN1P39748 BEND7P1-201ENST00000422058 457 ntBASIC3.13□□□□□ -1.91
FEN1P39748 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.13□□□□□ -1.91
FEN1P39748 AL358232.1-201ENST00000448030 501 ntBASIC3.13□□□□□ -1.91
FEN1P39748 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.13□□□□□ -1.91
FEN1P39748 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.13□□□□□ -1.91
FEN1P39748 RPL30P6-201ENST00000475925 342 ntBASIC3.13□□□□□ -1.91
FEN1P39748 AP001025.2-201ENST00000490908 477 ntBASIC3.13□□□□□ -1.91
FEN1P39748 AC106872.3-201ENST00000495104 446 ntBASIC3.13□□□□□ -1.91
FEN1P39748 AC093663.1-201ENST00000497190 394 ntBASIC3.13□□□□□ -1.91
FEN1P39748 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.13□□□□□ -1.91
FEN1P39748 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.13□□□□□ -1.91
FEN1P39748 AC022447.3-201ENST00000506865 495 ntBASIC3.13□□□□□ -1.91
FEN1P39748 AC005178.1-201ENST00000508392 440 ntBASIC3.13□□□□□ -1.91
FEN1P39748 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.13□□□□□ -1.91
FEN1P39748 DUXAP2-201ENST00000519198 589 ntBASIC3.13□□□□□ -1.91
FEN1P39748 AP004247.1-201ENST00000531556 1289 ntBASIC3.13□□□□□ -1.91
FEN1P39748 AC013828.2-201ENST00000532487 235 ntBASIC3.13□□□□□ -1.91
FEN1P39748 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.13□□□□□ -1.91
FEN1P39748 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.13□□□□□ -1.91
FEN1P39748 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.13□□□□□ -1.91
FEN1P39748 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.13□□□□□ -1.91
FEN1P39748 AC011260.1-201ENST00000578420 472 ntBASIC3.13□□□□□ -1.91
FEN1P39748 MIR4444-1-201ENST00000581696 74 ntBASIC3.13□□□□□ -1.91
FEN1P39748 MIR4444-2-201ENST00000584390 74 ntBASIC3.13□□□□□ -1.91
FEN1P39748 MIR4276-201ENST00000584832 70 ntBASIC3.13□□□□□ -1.91
FEN1P39748 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.13□□□□□ -1.91
FEN1P39748 BNIP3P33-201ENST00000598912 569 ntBASIC3.13□□□□□ -1.91
FEN1P39748 AC002550.2-201ENST00000621246 394 ntBASIC3.13□□□□□ -1.91
FEN1P39748 AC078883.4-201ENST00000623218 367 ntBASIC3.13□□□□□ -1.91
FEN1P39748 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.13□□□□□ -1.91
FEN1P39748 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FEN1P39748 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FEN1P39748 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.12□□□□□ -1.91
FEN1P39748 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
FEN1P39748 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.12□□□□□ -1.91
FEN1P39748 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.12□□□□□ -1.91
FEN1P39748 AL356274.2-201ENST00000624379 3752 ntBASIC3.12□□□□□ -1.91
FEN1P39748 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
FEN1P39748 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
FEN1P39748 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
FEN1P39748 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FEN1P39748 RPS3AP26-201ENST00000398259 784 ntBASIC3.12□□□□□ -1.91
FEN1P39748 SKINT1L-201ENST00000401057 817 ntBASIC3.12□□□□□ -1.91
FEN1P39748 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.12□□□□□ -1.91
FEN1P39748 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.12□□□□□ -1.91
FEN1P39748 DUTP6-201ENST00000425573 462 ntBASIC3.12□□□□□ -1.91
FEN1P39748 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.12□□□□□ -1.91
FEN1P39748 RPL21P40-201ENST00000428586 483 ntBASIC3.12□□□□□ -1.91
FEN1P39748 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.12□□□□□ -1.91
FEN1P39748 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.12□□□□□ -1.91
FEN1P39748 SNORD121B-201ENST00000458838 81 ntBASIC3.12□□□□□ -1.91
FEN1P39748 snoU13.4-201ENST00000458916 104 ntBASIC3.12□□□□□ -1.91
FEN1P39748 HMGN2P13-201ENST00000476476 274 ntBASIC3.12□□□□□ -1.91
FEN1P39748 RPS3AP43-201ENST00000479743 781 ntBASIC3.12□□□□□ -1.91
FEN1P39748 BET1P1-201ENST00000482276 359 ntBASIC3.12□□□□□ -1.91
FEN1P39748 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.12□□□□□ -1.91
FEN1P39748 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.12□□□□□ -1.91
FEN1P39748 RPF2P2-201ENST00000504693 896 ntBASIC3.12□□□□□ -1.91
FEN1P39748 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FEN1P39748 AC111000.2-201ENST00000507775 550 ntBASIC3.12□□□□□ -1.91
FEN1P39748 KLHL2P1-201ENST00000508691 521 ntBASIC3.12□□□□□ -1.91
FEN1P39748 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.12□□□□□ -1.91
FEN1P39748 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.12□□□□□ -1.91
FEN1P39748 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.12□□□□□ -1.91
FEN1P39748 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.12□□□□□ -1.91
FEN1P39748 AP003497.1-201ENST00000528472 562 ntBASIC3.12□□□□□ -1.91
FEN1P39748 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.12□□□□□ -1.91
FEN1P39748 AC068587.4-201ENST00000533893 186 ntBASIC3.12□□□□□ -1.91
FEN1P39748 AC004024.1-201ENST00000549244 247 ntBASIC3.12□□□□□ -1.91
FEN1P39748 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.12□□□□□ -1.91
FEN1P39748 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.12□□□□□ -1.91
FEN1P39748 AP001004.1-201ENST00000582468 324 ntBASIC3.12□□□□□ -1.91
FEN1P39748 SNORD84-203ENST00000584275 78 ntBASIC3.12□□□□□ -1.91
FEN1P39748 AC013444.2-201ENST00000603317 787 ntBASIC3.12□□□□□ -1.91
FEN1P39748 MTCYBP22-201ENST00000603788 447 ntBASIC3.12□□□□□ -1.91
FEN1P39748 AC106028.5-201ENST00000610332 395 ntBASIC3.12□□□□□ -1.91
FEN1P39748 uc_338.1-201ENST00000612113 180 ntBASIC3.12□□□□□ -1.91
FEN1P39748 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.12□□□□□ -1.91
FEN1P39748 AC244100.1-202ENST00000621554 382 ntBASIC3.12□□□□□ -1.91
FEN1P39748 AL356266.1-201ENST00000623311 483 ntBASIC3.12□□□□□ -1.91
FEN1P39748 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FEN1P39748 MTCO1P12-201ENST00000414273 1543 ntBASIC3.12□□□□□ -1.91
FEN1P39748 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
FEN1P39748 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.11□□□□□ -1.91
FEN1P39748 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
FEN1P39748 FRG1BP-201ENST00000278882 761 ntBASIC3.11□□□□□ -1.91
FEN1P39748 SNORA71.3-201ENST00000362582 128 ntBASIC3.11□□□□□ -1.91
FEN1P39748 RNU1-70P-201ENST00000362618 164 ntBASIC3.11□□□□□ -1.91
FEN1P39748 RNU6-853P-201ENST00000364306 107 ntBASIC3.11□□□□□ -1.91
FEN1P39748 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
FEN1P39748 RNY3P9-201ENST00000384727 106 ntBASIC3.11□□□□□ -1.91
FEN1P39748 AL031577.2-201ENST00000404133 280 ntBASIC3.11□□□□□ -1.91
FEN1P39748 HMGB3P23-201ENST00000414981 585 ntBASIC3.11□□□□□ -1.91
FEN1P39748 SSXP9-201ENST00000417503 292 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms