Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
ERCC3P19447 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ERCC3P19447 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.45□□□□□ -1.54
ERCC3P19447 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
ERCC3P19447 RNU6-38P-201ENST00000384085 107 ntBASIC5.45□□□□□ -1.54
ERCC3P19447 RNU6-550P-201ENST00000391057 101 ntBASIC5.45□□□□□ -1.54
ERCC3P19447 RNU4-46P-201ENST00000410818 138 ntBASIC5.45□□□□□ -1.54
ERCC3P19447 EI24P1-201ENST00000416584 867 ntBASIC5.45□□□□□ -1.54
ERCC3P19447 BTF3L4P3-201ENST00000418879 476 ntBASIC5.45□□□□□ -1.54
ERCC3P19447 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.45□□□□□ -1.54
ERCC3P19447 AL353678.1-201ENST00000422735 741 ntBASIC5.45□□□□□ -1.54
ERCC3P19447 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.45□□□□□ -1.54
ERCC3P19447 RPL21P112-201ENST00000434403 463 ntBASIC5.45□□□□□ -1.54
ERCC3P19447 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.45□□□□□ -1.54
ERCC3P19447 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.45□□□□□ -1.54
ERCC3P19447 UBE2V1P7-201ENST00000446395 340 ntBASIC5.45□□□□□ -1.54
ERCC3P19447 RNU6-333P-201ENST00000459117 107 ntBASIC5.45□□□□□ -1.54
ERCC3P19447 RN7SL517P-201ENST00000462240 305 ntBASIC5.45□□□□□ -1.54
ERCC3P19447 TRBV1-201ENST00000476502 284 ntBASIC5.45□□□□□ -1.54
ERCC3P19447 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.45□□□□□ -1.54
ERCC3P19447 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.45□□□□□ -1.54
ERCC3P19447 Y_RNA.675-201ENST00000516389 149 ntBASIC5.45□□□□□ -1.54
ERCC3P19447 Y_RNA.719-201ENST00000517156 106 ntBASIC5.45□□□□□ -1.54
ERCC3P19447 AC105031.1-201ENST00000518550 476 ntBASIC5.45□□□□□ -1.54
ERCC3P19447 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.45□□□□□ -1.54
ERCC3P19447 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.45□□□□□ -1.54
ERCC3P19447 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.45□□□□□ -1.54
ERCC3P19447 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.45□□□□□ -1.54
ERCC3P19447 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
ERCC3P19447 AC007424.1-203ENST00000554613 687 ntBASIC5.45□□□□□ -1.54
ERCC3P19447 AC093249.4-201ENST00000564755 259 ntBASIC5.45□□□□□ -1.54
ERCC3P19447 MIR5583-1-201ENST00000580941 59 ntBASIC5.45□□□□□ -1.54
ERCC3P19447 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ERCC3P19447 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.45□□□□□ -1.54
ERCC3P19447 AC008521.1-201ENST00000587471 187 ntBASIC5.45□□□□□ -1.54
ERCC3P19447 AL138889.2-201ENST00000603883 242 ntBASIC5.45□□□□□ -1.54
ERCC3P19447 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.45□□□□□ -1.54
ERCC3P19447 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ERCC3P19447 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
ERCC3P19447 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
ERCC3P19447 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.45□□□□□ -1.54
ERCC3P19447 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ERCC3P19447 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
ERCC3P19447 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
ERCC3P19447 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.45□□□□□ -1.54
ERCC3P19447 OR4G2P-202ENST00000641004 1759 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 PRO1804-201ENST00000623780 2050 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
ERCC3P19447 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.44□□□□□ -1.54
ERCC3P19447 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
ERCC3P19447 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 AP001350.1-201ENST00000601906 1524 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.44□□□□□ -1.54
ERCC3P19447 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.44□□□□□ -1.54
ERCC3P19447 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
ERCC3P19447 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
ERCC3P19447 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
ERCC3P19447 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
ERCC3P19447 Y_RNA.263-201ENST00000364659 114 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 RNU6-510P-201ENST00000391239 108 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 CISD1P1-201ENST00000393907 327 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 AL139039.1-201ENST00000401900 692 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 AL591848.1-201ENST00000413092 322 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 AC092809.3-201ENST00000415453 231 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 AC140479.3-201ENST00000418944 1126 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 MTND4P28-201ENST00000426217 387 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 SRIP2-201ENST00000428470 166 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.44□□□□□ -1.54
ERCC3P19447 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.44□□□□□ -1.54
ERCC3P19447 AC020550.1-201ENST00000447385 163 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 RNU6-953P-201ENST00000459154 107 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 RNU7-180P-201ENST00000459240 63 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 RPL37P6-201ENST00000460682 294 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 HMGN2P26-201ENST00000463169 339 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 AC092451.1-201ENST00000480211 153 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.44□□□□□ -1.54
ERCC3P19447 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.44□□□□□ -1.54
ERCC3P19447 RNU6-1314P-201ENST00000517139 104 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 RNU6-709P-201ENST00000517257 104 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 AP001781.1-201ENST00000530977 207 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.44□□□□□ -1.54
ERCC3P19447 FKBP1BP1-201ENST00000553366 325 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 AC105129.1-201ENST00000560250 297 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 AC037471.2-201ENST00000564941 598 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 AC084783.1-201ENST00000565846 910 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 AC069061.3-201ENST00000582254 823 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.44□□□□□ -1.54
ERCC3P19447 AC002545.1-201ENST00000592511 181 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.44□□□□□ -1.54
ERCC3P19447 AC020910.2-201ENST00000603635 610 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ERCC3P19447 AL359547.2-201ENST00000615810 418 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 BX005214.3-202ENST00000619809 325 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 AL360181.4-201ENST00000621752 134 ntBASIC5.44□□□□□ -1.54
ERCC3P19447 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
ERCC3P19447 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
ERCC3P19447 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ERCC3P19447 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.44□□□□□ -1.54
ERCC3P19447 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.44□□□□□ -1.54
ERCC3P19447 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms