Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTNND1O60716 AC073346.2-201ENST00000624724 2058 ntBASIC4.44□□□□□ -1.7
CTNND1O60716 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.44□□□□□ -1.7
CTNND1O60716 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTNND1O60716 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTNND1O60716 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTNND1O60716 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CTNND1O60716 XIAPP3-201ENST00000312918 795 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 RNU5A-8P-201ENST00000364102 114 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 MIR218-2-201ENST00000385006 110 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 RNU6-278P-201ENST00000390945 109 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 RNU2-43P-201ENST00000410306 190 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 ISCA1P6-201ENST00000427740 390 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.43□□□□□ -1.7
CTNND1O60716 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.43□□□□□ -1.7
CTNND1O60716 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.43□□□□□ -1.7
CTNND1O60716 TIMM9P1-201ENST00000436122 256 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.43□□□□□ -1.7
CTNND1O60716 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.43□□□□□ -1.7
CTNND1O60716 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.43□□□□□ -1.7
CTNND1O60716 NPM1P49-201ENST00000448027 714 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 RPS24P6-201ENST00000452670 400 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 SNORD105B-201ENST00000458770 79 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 RNU7-59P-201ENST00000459101 61 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 AC135721.1-201ENST00000497954 479 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 AC078918.1-201ENST00000498515 228 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 AC020893.1-201ENST00000502452 580 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 AC138853.1-201ENST00000503549 823 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.43□□□□□ -1.7
CTNND1O60716 MTCO2P4-201ENST00000517968 247 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.43□□□□□ -1.7
CTNND1O60716 AP000857.1-201ENST00000532151 543 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 OR5B10P-201ENST00000532869 642 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.43□□□□□ -1.7
CTNND1O60716 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.43□□□□□ -1.7
CTNND1O60716 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.43□□□□□ -1.7
CTNND1O60716 AC006270.2-201ENST00000578523 652 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.43□□□□□ -1.7
CTNND1O60716 AL161729.4-201ENST00000604650 476 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 SNORA62.6-201ENST00000606322 83 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.43□□□□□ -1.7
CTNND1O60716 AC093838.1-201ENST00000613014 469 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 AC091953.5-201ENST00000622919 233 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 C2orf27A-204ENST00000623058 969 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.43□□□□□ -1.7
CTNND1O60716 AC243312.2-201ENST00000623340 601 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 AC019226.1-201ENST00000625666 515 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.43□□□□□ -1.7
CTNND1O60716 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.43□□□□□ -1.7
CTNND1O60716 AL049781.1-201ENST00000623195 3585 ntBASIC4.43□□□□□ -1.7
CTNND1O60716 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CTNND1O60716 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CTNND1O60716 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTNND1O60716 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CTNND1O60716 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTNND1O60716 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CTNND1O60716 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CTNND1O60716 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTNND1O60716 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.42□□□□□ -1.7
CTNND1O60716 RNU6-525P-201ENST00000363685 104 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 SNORA7.2-201ENST00000364446 145 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 RNU6-259P-201ENST00000383999 107 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 RNU6-432P-201ENST00000384196 109 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 MIR483-201ENST00000385070 76 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 RNU6-882P-201ENST00000391025 103 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 RPL23AP32-201ENST00000395315 459 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.42□□□□□ -1.7
CTNND1O60716 SSXP9-201ENST00000417503 292 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 BX295541.1-201ENST00000417774 250 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.42□□□□□ -1.7
CTNND1O60716 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.42□□□□□ -1.7
CTNND1O60716 RPL21P112-201ENST00000434403 463 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CTNND1O60716 ARPC3P1-201ENST00000437218 533 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 RPL21P23-201ENST00000446654 460 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.42□□□□□ -1.7
CTNND1O60716 HMGB3P22-202ENST00000451823 572 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 AC108059.3-201ENST00000456388 214 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.42□□□□□ -1.7
CTNND1O60716 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.42□□□□□ -1.7
CTNND1O60716 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.42□□□□□ -1.7
CTNND1O60716 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.42□□□□□ -1.7
CTNND1O60716 AC010587.1-201ENST00000505809 469 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.42□□□□□ -1.7
CTNND1O60716 AC022483.1-201ENST00000514020 567 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 RNU6-430P-201ENST00000517078 107 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.42□□□□□ -1.7
CTNND1O60716 DEFB108D-201ENST00000527787 222 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.42□□□□□ -1.7
CTNND1O60716 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.42□□□□□ -1.7
CTNND1O60716 AC109635.4-202ENST00000531666 412 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.42□□□□□ -1.7
CTNND1O60716 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.42□□□□□ -1.7
CTNND1O60716 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.42□□□□□ -1.7
CTNND1O60716 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.42□□□□□ -1.7
CTNND1O60716 AL133153.1-201ENST00000557756 303 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 EIF1P4-201ENST00000572664 335 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 AC005951.1-201ENST00000576706 485 ntBASIC4.42□□□□□ -1.7
CTNND1O60716 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CTNND1O60716 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms