Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 RNU4-42P-201ENST00000364738 142 ntBASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 Y_RNA.297-201ENST00000364950 91 ntBASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 MIR589-201ENST00000385238 99 ntBASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 HSPA8P15-201ENST00000401676 786 ntBASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 AL391361.1-201ENST00000405580 489 ntBASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 MIR548H3-201ENST00000408771 118 ntBASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 CALM2P2-201ENST00000428512 440 ntBASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 AL158071.1-201ENST00000430315 461 ntBASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 RHOT1P3-201ENST00000436571 331 ntBASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 FCF1P4-201ENST00000448326 183 ntBASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 AL139109.1-201ENST00000455491 297 ntBASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 SNORD121B-201ENST00000458838 81 ntBASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 AC087884.1-201ENST00000469738 328 ntBASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 RNU5B-3P-201ENST00000516601 115 ntBASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 MIR4489-201ENST00000578869 62 ntBASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 MIR8080-201ENST00000622224 89 ntBASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 AL034549.2-201ENST00000618285 3373 ntBASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 Z95331.1-201ENST00000623075 23112 ntBASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 AL445437.1-201ENST00000623157 3087 ntBASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 RNA5SP319-201ENST00000362768 119 ntBASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 RN7SKP224-201ENST00000364140 325 ntBASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 RNU6-125P-201ENST00000384505 107 ntBASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 RNU6-293P-201ENST00000411259 106 ntBASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 AC092162.1-201ENST00000432828 434 ntBASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 NOP56P2-201ENST00000447491 769 ntBASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 RNA5SP103-201ENST00000459503 118 ntBASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 RPS26P39-201ENST00000469206 341 ntBASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 RNU6-397P-201ENST00000516226 104 ntBASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 IGKV2-18-201ENST00000522607 343 ntBASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 MIR3176-201ENST00000582210 90 ntBASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 AC010900.2-201ENST00000604508 210 ntBASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 AC243654.2-201ENST00000612843 443 ntBASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 AL512624.1-201ENST00000613638 469 ntBASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 AC130454.1-201ENST00000622948 401 ntBASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 CR392039.4-201ENST00000624968 501 ntBASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 AC073136.1-201ENST00000449426 2884 ntBASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.72□□□□□ -1.49
NUCKS1Q9H1E3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.71□□□□□ -1.49
NUCKS1Q9H1E3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 RN7SKP162-201ENST00000363605 345 ntBASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 RNA5SP223-201ENST00000365174 120 ntBASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 SNORA16A-201ENST00000384342 137 ntBASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 MIR137-201ENST00000385223 102 ntBASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 SAR1AP2-201ENST00000392696 594 ntBASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 PSMA2P3-201ENST00000429685 675 ntBASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 RPS11P7-201ENST00000442125 465 ntBASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 SNORD97-201ENST00000459187 142 ntBASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 RN7SL51P-201ENST00000468230 285 ntBASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 RN7SL189P-201ENST00000468631 289 ntBASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.71□□□□□ -1.5
NUCKS1Q9H1E3 AC006427.1-201ENST00000514359 712 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms