Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 AC139495.1-202ENST00000513164 354 ntBASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 Vault.3-201ENST00000516676 95 ntBASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 AC105029.1-201ENST00000520250 669 ntBASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 PHBP17-201ENST00000528576 541 ntBASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 AL109766.1-201ENST00000555080 552 ntBASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 AL031176.1-201ENST00000604554 466 ntBASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 AL590392.1-201ENST00000604960 446 ntBASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 AC068831.8-201ENST00000620171 435 ntBASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 AC024940.5-201ENST00000622889 474 ntBASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 AC005858.4-201ENST00000623191 700 ntBASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 AC112200.1-201ENST00000625015 234 ntBASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SIMC1Q8NDZ2 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 LINC00622-201ENST00000562811 1570 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 Y_RNA.157-201ENST00000363638 102 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 MIR607-201ENST00000385241 96 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 RPL23AP32-201ENST00000395315 459 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 RPS4XP8-201ENST00000402039 771 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 RNU6-712P-201ENST00000410558 100 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 RNU2-8P-201ENST00000410727 190 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 MTATP6P18-201ENST00000417994 673 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 MTND2P23-201ENST00000422990 651 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 MTCO2P12-201ENST00000427426 682 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 HMGB1P25-201ENST00000468402 607 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 AC108022.1-201ENST00000493466 478 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 AC093677.1-201ENST00000514414 678 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 RNU6-201P-201ENST00000517100 61 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 AC022616.6-201ENST00000520479 119 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 AC018630.1-201ENST00000541376 925 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 AC011611.1-201ENST00000552179 197 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 AC055876.1-202ENST00000567053 138 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 MIR4277-201ENST00000578298 84 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 RPL7P50-201ENST00000600588 727 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 AL356585.4-201ENST00000623078 1229 ntBASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SIMC1Q8NDZ2 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 MIR513A2-201ENST00000385249 127 ntBASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 Z98745.1-201ENST00000402553 494 ntBASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 MRPL42P2-201ENST00000403169 426 ntBASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 AL122016.1-201ENST00000403365 367 ntBASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 SNRPFP1-201ENST00000414761 252 ntBASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 MRPL50P2-201ENST00000416821 482 ntBASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 RPS12P10-201ENST00000427031 377 ntBASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 AL606489.2-201ENST00000433886 234 ntBASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 RPL23AP43-201ENST00000446445 471 ntBASIC4.22□□□□□ -1.73
SIMC1Q8NDZ2 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms