Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
COL23A1Q86Y22 FARSBP1-201ENST00000435808 1778 ntBASIC4.54□□□□□ -1.68
COL23A1Q86Y22 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL23A1Q86Y22 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL23A1Q86Y22 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL23A1Q86Y22 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
COL23A1Q86Y22 AL035425.3-201ENST00000564206 4996 ntBASIC4.53□□□□□ -1.68
COL23A1Q86Y22 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL23A1Q86Y22 AC233263.6-201ENST00000631132 1963 ntBASIC4.53□□□□□ -1.68
COL23A1Q86Y22 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL23A1Q86Y22 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.53□□□□□ -1.68
COL23A1Q86Y22 SNORA40.3-201ENST00000390964 122 ntBASIC4.53□□□□□ -1.68
COL23A1Q86Y22 UBE2V1P2-201ENST00000397758 440 ntBASIC4.53□□□□□ -1.68
COL23A1Q86Y22 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.53□□□□□ -1.68
COL23A1Q86Y22 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.53□□□□□ -1.68
COL23A1Q86Y22 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.53□□□□□ -1.68
COL23A1Q86Y22 AL353691.1-201ENST00000451332 387 ntBASIC4.53□□□□□ -1.68
COL23A1Q86Y22 Z82190.1-201ENST00000454534 490 ntBASIC4.53□□□□□ -1.68
COL23A1Q86Y22 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.53□□□□□ -1.68
COL23A1Q86Y22 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL23A1Q86Y22 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.53□□□□□ -1.68
COL23A1Q86Y22 IGKV2D-36-201ENST00000518643 226 ntBASIC4.53□□□□□ -1.68
COL23A1Q86Y22 AC107954.1-201ENST00000565906 727 ntBASIC4.53□□□□□ -1.68
COL23A1Q86Y22 AC010546.1-201ENST00000569391 485 ntBASIC4.53□□□□□ -1.68
COL23A1Q86Y22 MIR5004-201ENST00000579078 107 ntBASIC4.53□□□□□ -1.68
COL23A1Q86Y22 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.53□□□□□ -1.68
COL23A1Q86Y22 AC006504.3-201ENST00000586818 523 ntBASIC4.53□□□□□ -1.68
COL23A1Q86Y22 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.53□□□□□ -1.68
COL23A1Q86Y22 AL589743.7-201ENST00000612637 233 ntBASIC4.53□□□□□ -1.68
COL23A1Q86Y22 AC072046.2-201ENST00000618366 268 ntBASIC4.53□□□□□ -1.68
COL23A1Q86Y22 AC002550.2-201ENST00000621246 394 ntBASIC4.53□□□□□ -1.68
COL23A1Q86Y22 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
COL23A1Q86Y22 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL23A1Q86Y22 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL23A1Q86Y22 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL23A1Q86Y22 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL23A1Q86Y22 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.53□□□□□ -1.68
COL23A1Q86Y22 AC092447.7-201ENST00000422212 1621 ntBASIC4.53□□□□□ -1.68
COL23A1Q86Y22 AC011460.1-201ENST00000636268 1834 ntBASIC4.53□□□□□ -1.68
COL23A1Q86Y22 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 RNU5A-6P-201ENST00000384136 116 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 Y_RNA.582-201ENST00000391023 95 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 RPL7P25-201ENST00000404151 721 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 AL359704.1-201ENST00000411586 781 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 MRPS18BP2-201ENST00000434310 759 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 RPL22P17-201ENST00000438729 315 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 MTCO1P42-201ENST00000457379 726 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 RPL31P61-201ENST00000496160 376 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 AC025554.1-201ENST00000505641 188 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 RNU6-27P-201ENST00000516146 107 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 AP002748.2-201ENST00000528671 348 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 AP001094.1-201ENST00000579805 193 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 AC091805.2-201ENST00000603848 235 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 AC011451.2-201ENST00000604303 598 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 AC090578.1-201ENST00000604955 591 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 RNU6-87P-201ENST00000607561 108 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 Z99129.1-201ENST00000612510 255 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 AL162274.2-201ENST00000614406 332 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 AC233309.1-201ENST00000619522 751 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 AC091925.2-201ENST00000625059 256 ntBASIC4.52□□□□□ -1.69
COL23A1Q86Y22 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
COL23A1Q86Y22 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL23A1Q86Y22 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
COL23A1Q86Y22 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.51□□□□□ -1.69
COL23A1Q86Y22 AC244517.1-201ENST00000606030 2086 ntBASIC4.51□□□□□ -1.69
COL23A1Q86Y22 RNU6-853P-201ENST00000364306 107 ntBASIC4.51□□□□□ -1.69
COL23A1Q86Y22 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
COL23A1Q86Y22 RNU6-301P-201ENST00000384277 107 ntBASIC4.51□□□□□ -1.69
COL23A1Q86Y22 RNU6-1207P-201ENST00000384343 107 ntBASIC4.51□□□□□ -1.69
COL23A1Q86Y22 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
COL23A1Q86Y22 Y_RNA.599-201ENST00000410489 109 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms