Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 RNU6-1159P-201ENST00000362933 107 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 RNU6-353P-201ENST00000364266 108 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.36□□□□□ -1.87
PTCH1Q13635 UBE2D3P3-201ENST00000426992 425 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 ARF4P2-201ENST00000430209 526 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.36□□□□□ -1.87
PTCH1Q13635 AC104389.3-201ENST00000445629 235 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.36□□□□□ -1.87
PTCH1Q13635 GSTA11P-201ENST00000452866 669 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 AC068587.2-201ENST00000478386 781 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 AC012181.1-201ENST00000479895 423 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 VPS26AP1-201ENST00000483197 979 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 OR4G11P-201ENST00000492842 939 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.36□□□□□ -1.87
PTCH1Q13635 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.36□□□□□ -1.87
PTCH1Q13635 AC107222.1-201ENST00000510899 637 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 RNU6-334P-201ENST00000517072 102 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.36□□□□□ -1.87
PTCH1Q13635 AC021269.2-201ENST00000532318 330 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.36□□□□□ -1.87
PTCH1Q13635 AC005014.3-201ENST00000605985 190 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 AC046143.2-201ENST00000609789 160 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 AC006329.2-201ENST00000611491 394 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.36□□□□□ -1.87
PTCH1Q13635 AL136164.4-201ENST00000625013 2135 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTCH1Q13635 AC111188.2-201ENST00000529697 1387 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 AC244517.1-201ENST00000606030 2086 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.36□□□□□ -1.87
PTCH1Q13635 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PTCH1Q13635 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.36□□□□□ -1.87
PTCH1Q13635 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PTCH1Q13635 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 HMGN2P20-201ENST00000437531 273 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 SSXP4-201ENST00000451349 245 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.36□□□□□ -1.87
PTCH1Q13635 TRBV1-201ENST00000476502 284 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.36□□□□□ -1.87
PTCH1Q13635 MTCYBP37-201ENST00000510642 1133 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 AP000790.1-201ENST00000528891 737 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 AP001317.1-201ENST00000531194 960 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.36□□□□□ -1.87
PTCH1Q13635 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.36□□□□□ -1.87
PTCH1Q13635 AC087481.2-201ENST00000565492 330 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 AC093519.1-201ENST00000566109 298 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 AC006254.3-201ENST00000603353 884 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 AC018755.4-201ENST00000619715 454 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 AL356094.1-201ENST00000624663 1212 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 AC110994.2-201ENST00000635481 492 ntBASIC3.36□□□□□ -1.87
PTCH1Q13635 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.35□□□□□ -1.87
PTCH1Q13635 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PTCH1Q13635 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PTCH1Q13635 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PTCH1Q13635 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PTCH1Q13635 DBF4P1-201ENST00000412976 1892 ntBASIC3.35□□□□□ -1.87
PTCH1Q13635 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PTCH1Q13635 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PTCH1Q13635 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PTCH1Q13635 AC002546.1-201ENST00000588041 2504 ntBASIC3.35□□□□□ -1.87
PTCH1Q13635 SNORD82-201ENST00000365530 70 ntBASIC3.35□□□□□ -1.87
PTCH1Q13635 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PTCH1Q13635 AL139098.1-201ENST00000407291 389 ntBASIC3.35□□□□□ -1.87
PTCH1Q13635 RN7SKP140-201ENST00000411196 284 ntBASIC3.35□□□□□ -1.87
PTCH1Q13635 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.35□□□□□ -1.87
PTCH1Q13635 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.35□□□□□ -1.87
PTCH1Q13635 RPL36AP33-201ENST00000450395 310 ntBASIC3.35□□□□□ -1.87
PTCH1Q13635 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.35□□□□□ -1.87
PTCH1Q13635 MTND4P2-201ENST00000507767 1203 ntBASIC3.35□□□□□ -1.87
PTCH1Q13635 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.35□□□□□ -1.87
PTCH1Q13635 RNA5SP135-201ENST00000517019 125 ntBASIC3.35□□□□□ -1.87
PTCH1Q13635 RNU6-467P-201ENST00000517027 110 ntBASIC3.35□□□□□ -1.87
PTCH1Q13635 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.35□□□□□ -1.87
PTCH1Q13635 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.35□□□□□ -1.87
PTCH1Q13635 AC026464.5-201ENST00000562497 722 ntBASIC3.35□□□□□ -1.87
PTCH1Q13635 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.35□□□□□ -1.87
PTCH1Q13635 MIR4474-201ENST00000579189 78 ntBASIC3.35□□□□□ -1.87
PTCH1Q13635 AP001004.1-201ENST00000582468 324 ntBASIC3.35□□□□□ -1.87
PTCH1Q13635 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.35□□□□□ -1.87
PTCH1Q13635 AL512506.1-201ENST00000613918 449 ntBASIC3.35□□□□□ -1.87
PTCH1Q13635 AL512506.2-201ENST00000624472 458 ntBASIC3.35□□□□□ -1.87
PTCH1Q13635 BX649567.1-201ENST00000642071 1134 ntBASIC3.35□□□□□ -1.87
PTCH1Q13635 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.35□□□□□ -1.87
PTCH1Q13635 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
PTCH1Q13635 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
PTCH1Q13635 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PTCH1Q13635 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PTCH1Q13635 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
PTCH1Q13635 RNU6-354P-201ENST00000383862 107 ntBASIC3.34□□□□□ -1.88
PTCH1Q13635 RNU6-610P-201ENST00000384264 107 ntBASIC3.34□□□□□ -1.88
PTCH1Q13635 SNORA40.4-201ENST00000390971 128 ntBASIC3.34□□□□□ -1.88
PTCH1Q13635 RN7SKP123-201ENST00000410732 291 ntBASIC3.34□□□□□ -1.88
PTCH1Q13635 RNA5SP344-201ENST00000411081 104 ntBASIC3.34□□□□□ -1.88
PTCH1Q13635 SFR1P2-201ENST00000421841 730 ntBASIC3.34□□□□□ -1.88
PTCH1Q13635 AC005345.1-201ENST00000431868 217 ntBASIC3.34□□□□□ -1.88
PTCH1Q13635 MTCYBP31-201ENST00000438855 1122 ntBASIC3.34□□□□□ -1.88
PTCH1Q13635 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.34□□□□□ -1.88
PTCH1Q13635 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.34□□□□□ -1.88
PTCH1Q13635 RPL23AP42-201ENST00000471152 471 ntBASIC3.34□□□□□ -1.88
PTCH1Q13635 RN7SL499P-201ENST00000481141 276 ntBASIC3.34□□□□□ -1.88
PTCH1Q13635 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms