Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RPL36AP39-201ENST00000445859 318 ntBASIC6.57□□□□□ -1.36
NUBP1P53384 RPL39P29-201ENST00000447779 157 ntBASIC6.57□□□□□ -1.36
NUBP1P53384 AL451050.1-201ENST00000450126 415 ntBASIC6.57□□□□□ -1.36
NUBP1P53384 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.57□□□□□ -1.36
NUBP1P53384 RPL23AP70-201ENST00000483361 460 ntBASIC6.57□□□□□ -1.36
NUBP1P53384 RNU6-537P-201ENST00000517277 103 ntBASIC6.57□□□□□ -1.36
NUBP1P53384 FTH1P11-201ENST00000517577 551 ntBASIC6.57□□□□□ -1.36
NUBP1P53384 AC090142.3-201ENST00000519012 385 ntBASIC6.57□□□□□ -1.36
NUBP1P53384 IGKV3D-31-201ENST00000519131 281 ntBASIC6.57□□□□□ -1.36
NUBP1P53384 AP005639.1-201ENST00000526939 192 ntBASIC6.57□□□□□ -1.36
NUBP1P53384 TRAV28-201ENST00000557548 323 ntBASIC6.57□□□□□ -1.36
NUBP1P53384 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC6.57□□□□□ -1.36
NUBP1P53384 MIR4301-201ENST00000577203 66 ntBASIC6.57□□□□□ -1.36
NUBP1P53384 SNORD95-201ENST00000579879 68 ntBASIC6.57□□□□□ -1.36
NUBP1P53384 IPO5P1-202ENST00000600039 287 ntBASIC6.57□□□□□ -1.36
NUBP1P53384 LINC01963-201ENST00000562038 3148 ntBASIC6.57□□□□□ -1.36
NUBP1P53384 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
NUBP1P53384 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NUBP1P53384 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
NUBP1P53384 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NUBP1P53384 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NUBP1P53384 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NUBP1P53384 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NUBP1P53384 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NUBP1P53384 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
NUBP1P53384 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.56□□□□□ -1.36
NUBP1P53384 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NUBP1P53384 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.56□□□□□ -1.36
NUBP1P53384 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.56□□□□□ -1.36
NUBP1P53384 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NUBP1P53384 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
NUBP1P53384 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.56□□□□□ -1.36
NUBP1P53384 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NUBP1P53384 OR13C1P-202ENST00000641378 2919 ntBASIC6.56□□□□□ -1.36
NUBP1P53384 Y_RNA.116-201ENST00000363292 103 ntBASIC6.56□□□□□ -1.36
NUBP1P53384 SNORA72.4-201ENST00000384174 132 ntBASIC6.56□□□□□ -1.36
NUBP1P53384 SNORD116-21-201ENST00000384507 92 ntBASIC6.56□□□□□ -1.36
NUBP1P53384 Y_RNA.572-201ENST00000384757 98 ntBASIC6.56□□□□□ -1.36
NUBP1P53384 MIR320B2-201ENST00000408479 138 ntBASIC6.56□□□□□ -1.36
NUBP1P53384 RPS20P14-201ENST00000412545 360 ntBASIC6.56□□□□□ -1.36
NUBP1P53384 SNRPEP9-201ENST00000436794 238 ntBASIC6.56□□□□□ -1.36
NUBP1P53384 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.56□□□□□ -1.36
NUBP1P53384 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.56□□□□□ -1.36
NUBP1P53384 HMGB3P8-201ENST00000449709 577 ntBASIC6.56□□□□□ -1.36
NUBP1P53384 RPS23P7-201ENST00000466210 444 ntBASIC6.56□□□□□ -1.36
NUBP1P53384 UQCRHP4-201ENST00000471686 272 ntBASIC6.56□□□□□ -1.36
NUBP1P53384 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.56□□□□□ -1.36
NUBP1P53384 RNU2-12P-201ENST00000517216 168 ntBASIC6.56□□□□□ -1.36
NUBP1P53384 AC130365.2-201ENST00000525882 1201 ntBASIC6.56□□□□□ -1.36
NUBP1P53384 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NUBP1P53384 CYCSP39-201ENST00000565821 309 ntBASIC6.56□□□□□ -1.36
NUBP1P53384 AC118658.2-201ENST00000618697 459 ntBASIC6.56□□□□□ -1.36
NUBP1P53384 MIR8089-201ENST00000620165 82 ntBASIC6.56□□□□□ -1.36
NUBP1P53384 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
NUBP1P53384 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NUBP1P53384 AP003175.1-201ENST00000641383 6658 ntBASIC6.56□□□□□ -1.36
NUBP1P53384 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NUBP1P53384 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NUBP1P53384 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
NUBP1P53384 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NUBP1P53384 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NUBP1P53384 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
NUBP1P53384 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
NUBP1P53384 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NUBP1P53384 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
NUBP1P53384 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NUBP1P53384 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
NUBP1P53384 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NUBP1P53384 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
NUBP1P53384 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NUBP1P53384 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NUBP1P53384 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
NUBP1P53384 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.55□□□□□ -1.36
NUBP1P53384 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
NUBP1P53384 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
NUBP1P53384 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC6.55□□□□□ -1.36
NUBP1P53384 SNX18P3-202ENST00000565670 1750 ntBASIC6.55□□□□□ -1.36
NUBP1P53384 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NUBP1P53384 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
NUBP1P53384 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NUBP1P53384 RNU6-942P-201ENST00000363002 107 ntBASIC6.55□□□□□ -1.36
NUBP1P53384 MIR544A-201ENST00000384855 91 ntBASIC6.55□□□□□ -1.36
NUBP1P53384 MIR130B-202ENST00000385018 82 ntBASIC6.55□□□□□ -1.36
NUBP1P53384 RPS3AP2-201ENST00000407190 754 ntBASIC6.55□□□□□ -1.36
NUBP1P53384 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
NUBP1P53384 AL714022.1-201ENST00000439897 151 ntBASIC6.55□□□□□ -1.36
NUBP1P53384 AC091179.3-201ENST00000474761 144 ntBASIC6.55□□□□□ -1.36
NUBP1P53384 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.55□□□□□ -1.36
NUBP1P53384 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.55□□□□□ -1.36
NUBP1P53384 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.55□□□□□ -1.36
NUBP1P53384 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC6.55□□□□□ -1.36
NUBP1P53384 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC6.55□□□□□ -1.36
NUBP1P53384 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
NUBP1P53384 CTAGE11P-201ENST00000451540 2353 ntBASIC6.55□□□□□ -1.36
NUBP1P53384 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC6.55□□□□□ -1.36
NUBP1P53384 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.55□□□□□ -1.36
NUBP1P53384 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NUBP1P53384 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NUBP1P53384 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NUBP1P53384 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms