Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ITGA4P13612 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.95□□□□□ -1.62
ITGA4P13612 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ITGA4P13612 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.95□□□□□ -1.62
ITGA4P13612 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ITGA4P13612 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ITGA4P13612 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ITGA4P13612 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.94□□□□□ -1.62
ITGA4P13612 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ITGA4P13612 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ITGA4P13612 Y_RNA.259-201ENST00000364619 101 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 RN7SKP159-201ENST00000410657 292 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 AC114491.1-201ENST00000416095 246 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 AC068533.1-201ENST00000418542 415 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 MTND2P23-201ENST00000422990 651 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.94□□□□□ -1.62
ITGA4P13612 PRPS1P1-201ENST00000445305 876 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 RPL23AP43-201ENST00000446445 471 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 NIPA2P5-201ENST00000452282 464 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 AC005008.1-201ENST00000456151 612 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.94□□□□□ -1.62
ITGA4P13612 snoU109.4-201ENST00000458953 143 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 HMGB1P25-201ENST00000468402 607 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 NIP7P2-201ENST00000485801 544 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.94□□□□□ -1.62
ITGA4P13612 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.94□□□□□ -1.62
ITGA4P13612 AC022790.1-201ENST00000522872 204 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.94□□□□□ -1.62
ITGA4P13612 DEFB108D-201ENST00000527787 222 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.94□□□□□ -1.62
ITGA4P13612 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.94□□□□□ -1.62
ITGA4P13612 CR383656.7-201ENST00000548164 174 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 AC093249.1-201ENST00000567049 203 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 AC024619.4-201ENST00000580924 316 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 MIR5583-1-201ENST00000580941 59 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.94□□□□□ -1.62
ITGA4P13612 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.94□□□□□ -1.62
ITGA4P13612 BNIP3P22-201ENST00000593399 556 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.94□□□□□ -1.62
ITGA4P13612 AL162730.1-201ENST00000605734 292 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.94□□□□□ -1.62
ITGA4P13612 AL133215.3-201ENST00000609801 448 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 AL161637.1-201ENST00000622380 412 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 AC025034.2-201ENST00000623264 286 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.94□□□□□ -1.62
ITGA4P13612 MIR4496-201ENST00000635896 61 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.94□□□□□ -1.62
ITGA4P13612 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
ITGA4P13612 BDP1P-201ENST00000582658 1990 ntBASIC4.94□□□□□ -1.62
ITGA4P13612 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ITGA4P13612 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ITGA4P13612 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ITGA4P13612 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
ITGA4P13612 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ITGA4P13612 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
ITGA4P13612 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.94□□□□□ -1.62
ITGA4P13612 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ITGA4P13612 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
ITGA4P13612 PABPC1P7-201ENST00000413177 1513 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ITGA4P13612 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
ITGA4P13612 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
ITGA4P13612 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ITGA4P13612 AC011155.1-201ENST00000316512 456 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ITGA4P13612 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.93□□□□□ -1.62
ITGA4P13612 RNU1-20P-201ENST00000363314 162 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 U3.12-201ENST00000364498 214 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 RNU6-637P-201ENST00000384050 107 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
ITGA4P13612 RNU6-821P-201ENST00000390995 107 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ITGA4P13612 AC092447.6-201ENST00000414578 210 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 TMSB10P2-201ENST00000416049 131 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 AC093106.2-201ENST00000428212 385 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 AC011998.1-201ENST00000433403 117 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.93□□□□□ -1.62
ITGA4P13612 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.93□□□□□ -1.62
ITGA4P13612 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.93□□□□□ -1.62
ITGA4P13612 BRK1P2-201ENST00000442875 223 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.93□□□□□ -1.62
ITGA4P13612 AC007967.1-201ENST00000455422 1159 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 RNU7-66P-201ENST00000459469 62 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 AC079804.1-201ENST00000461922 436 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 AC083904.1-201ENST00000487828 231 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 RN7SKP122-201ENST00000515923 296 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 AP001804.3-201ENST00000525146 880 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.93□□□□□ -1.62
ITGA4P13612 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.93□□□□□ -1.62
ITGA4P13612 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.93□□□□□ -1.62
ITGA4P13612 RPL21P7-201ENST00000557463 483 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.93□□□□□ -1.62
ITGA4P13612 AC020661.2-201ENST00000560114 134 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 AC136624.4-201ENST00000573044 370 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.93□□□□□ -1.62
ITGA4P13612 AL355812.1-201ENST00000603215 216 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 AL590392.1-201ENST00000604960 446 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 AC012443.1-201ENST00000605605 231 ntBASIC4.93□□□□□ -1.62
ITGA4P13612 AC092807.2-201ENST00000609367 243 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms