Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 AP004607.3-201ENST00000530354 3915 ntBASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 AC138907.8-201ENST00000623981 2256 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 Y_RNA.383-201ENST00000383855 97 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 RNU6-937P-201ENST00000384325 106 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 AL033519.2-201ENST00000403958 392 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 MTCYBP2-201ENST00000407745 171 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 RPL19P1-201ENST00000411635 428 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 RPL26P6-201ENST00000440913 438 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 RPL7L1P1-201ENST00000448259 785 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 GEMIN2P1-201ENST00000454246 752 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 RNU1-88P-201ENST00000459274 128 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 HMGN1P11-201ENST00000508668 303 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 RNU1-86P-201ENST00000516108 154 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 RNU1-107P-201ENST00000516617 154 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 AC109479.2-201ENST00000517842 174 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 AC007956.1-201ENST00000555623 542 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 CYCSP38-201ENST00000559840 322 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 AC120057.2-201ENST00000571520 271 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 AL136131.3-201ENST00000607600 188 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 AC009318.2-201ENST00000610917 651 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 AC034102.8-201ENST00000615146 484 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 AC097372.5-201ENST00000623665 376 ntBASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC116Q8IYX3 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 SNORD50.1-201ENST00000362987 71 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 Y_RNA.292-201ENST00000364904 97 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 RPL21P67-201ENST00000402896 478 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 AC016739.1-201ENST00000405359 345 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 AF186996.5-201ENST00000418098 904 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 PPP1R11P2-201ENST00000423543 382 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 AC090774.1-201ENST00000435925 246 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 RNU7-87P-201ENST00000459343 62 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 PPIAP19-201ENST00000486414 492 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 RN7SL193P-201ENST00000491708 276 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 SNORD116-28-201ENST00000516123 91 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 RNA5SP473-201ENST00000516402 125 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 MIR4776-2-201ENST00000580204 80 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 PRPF19P1-201ENST00000584766 898 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 AC006115.2-201ENST00000596823 202 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 AL133481.2-203ENST00000607558 139 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 AC104465.1-201ENST00000611365 139 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 AC004852.3-201ENST00000614131 326 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 AL139099.4-201ENST00000614802 114 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 RMST_4.1-201ENST00000616886 107 ntBASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC116Q8IYX3 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms