Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NR1H2P55055 CUL1P1-201ENST00000509510 2425 ntBASIC3.81□□□□□ -1.8
NR1H2P55055 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.81□□□□□ -1.8
NR1H2P55055 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NR1H2P55055 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.8□□□□□ -1.8
NR1H2P55055 AC010733.2-201ENST00000589496 5702 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NR1H2P55055 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
NR1H2P55055 AP001486.2-201ENST00000561652 5113 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.8□□□□□ -1.8
NR1H2P55055 SPRR2C-201ENST00000290702 219 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 MIR331-201ENST00000362302 94 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 RNU4-75P-201ENST00000364621 146 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.8□□□□□ -1.8
NR1H2P55055 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
NR1H2P55055 Y_RNA.559-201ENST00000384686 107 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 SNORD116-4-201ENST00000384733 96 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 RNA5SP317-201ENST00000410176 116 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 RNA5SP311-201ENST00000411290 116 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 MTCO3P5-201ENST00000433620 714 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 KCTD9P3-201ENST00000434597 1169 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.8□□□□□ -1.8
NR1H2P55055 TXNP1-201ENST00000441872 371 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 AL512326.1-201ENST00000443050 721 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.8□□□□□ -1.8
NR1H2P55055 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NR1H2P55055 TPT1P14-201ENST00000448018 505 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 AL162389.1-201ENST00000449233 177 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 USP9YP12-201ENST00000450481 570 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 RPL23AP62-201ENST00000463396 453 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 RPS7P7-201ENST00000463499 571 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 AL049714.1-201ENST00000466686 347 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.8□□□□□ -1.8
NR1H2P55055 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NR1H2P55055 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.8□□□□□ -1.8
NR1H2P55055 AC079140.3-201ENST00000511111 550 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 SAP18P1-201ENST00000512058 390 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 RNA5SP315-201ENST00000516340 116 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 RNA5SP312-201ENST00000517068 116 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 SNORA31.22-201ENST00000517204 135 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 RNU6-840P-201ENST00000517275 65 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.8□□□□□ -1.8
NR1H2P55055 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.8□□□□□ -1.8
NR1H2P55055 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NR1H2P55055 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.8□□□□□ -1.8
NR1H2P55055 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.8□□□□□ -1.8
NR1H2P55055 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.8□□□□□ -1.8
NR1H2P55055 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.8□□□□□ -1.8
NR1H2P55055 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.8□□□□□ -1.8
NR1H2P55055 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.8□□□□□ -1.8
NR1H2P55055 AC012213.3-201ENST00000577199 777 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 AP000254.1-201ENST00000609934 520 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NR1H2P55055 RNVU1-4-201ENST00000612985 164 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
NR1H2P55055 AL021997.2-201ENST00000615674 271 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 AC104010.1-201ENST00000616889 150 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 MIR8059-201ENST00000620427 81 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 RNA5SP196-201ENST00000625967 102 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 MIR492-201ENST00000638676 116 ntBASIC3.8□□□□□ -1.8
NR1H2P55055 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NR1H2P55055 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NR1H2P55055 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
NR1H2P55055 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.8□□□□□ -1.8
NR1H2P55055 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
NR1H2P55055 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NR1H2P55055 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
NR1H2P55055 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NR1H2P55055 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NR1H2P55055 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NR1H2P55055 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NR1H2P55055 AC116667.1-201ENST00000604855 2072 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.79□□□□□ -1.8
NR1H2P55055 SNORA23-201ENST00000365128 182 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 Y_RNA.359-201ENST00000365498 102 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.79□□□□□ -1.8
NR1H2P55055 RNU1-13P-201ENST00000384499 162 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 SNORD115.1-201ENST00000391109 76 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 AL022722.2-201ENST00000402519 180 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 YPEL5P1-201ENST00000419731 367 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 AC008850.1-201ENST00000427546 362 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NR1H2P55055 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.79□□□□□ -1.8
NR1H2P55055 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.79□□□□□ -1.8
NR1H2P55055 MTND2P24-201ENST00000453434 806 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 SSXP1-201ENST00000453640 473 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 CFTRP1-201ENST00000456646 183 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.79□□□□□ -1.8
NR1H2P55055 AC004801.2-202ENST00000463559 283 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NR1H2P55055 RPL7L1P8-201ENST00000469911 741 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 AC041039.1-201ENST00000485656 536 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 AC055855.1-201ENST00000489563 579 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.79□□□□□ -1.8
NR1H2P55055 CDC42P4-201ENST00000510507 563 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.79□□□□□ -1.8
NR1H2P55055 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.79□□□□□ -1.8
NR1H2P55055 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 AC008489.1-201ENST00000524271 483 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms