Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
MSI1O43347 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
MSI1O43347 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
MSI1O43347 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MSI1O43347 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.89□□□□□ -1.79
MSI1O43347 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
MSI1O43347 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.89□□□□□ -1.79
MSI1O43347 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
MSI1O43347 RNU6-97P-201ENST00000363387 104 ntBASIC3.89□□□□□ -1.79
MSI1O43347 RNU6-263P-201ENST00000363811 107 ntBASIC3.89□□□□□ -1.79
MSI1O43347 RNY4P34-201ENST00000364779 95 ntBASIC3.89□□□□□ -1.79
MSI1O43347 RNU6-359P-201ENST00000365466 108 ntBASIC3.89□□□□□ -1.79
MSI1O43347 SNORD51-201ENST00000384320 80 ntBASIC3.89□□□□□ -1.79
MSI1O43347 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.89□□□□□ -1.79
MSI1O43347 USP9YP36-201ENST00000424581 829 ntBASIC3.89□□□□□ -1.79
MSI1O43347 AL353777.1-201ENST00000425552 326 ntBASIC3.89□□□□□ -1.79
MSI1O43347 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.89□□□□□ -1.79
MSI1O43347 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.89□□□□□ -1.79
MSI1O43347 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.89□□□□□ -1.79
MSI1O43347 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.89□□□□□ -1.79
MSI1O43347 AL590399.6-201ENST00000446396 307 ntBASIC3.89□□□□□ -1.79
MSI1O43347 RPL29P29-201ENST00000448725 423 ntBASIC3.89□□□□□ -1.79
MSI1O43347 AP1S2P1-201ENST00000457344 379 ntBASIC3.89□□□□□ -1.79
MSI1O43347 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.89□□□□□ -1.79
MSI1O43347 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.89□□□□□ -1.79
MSI1O43347 HMGB1P25-201ENST00000468402 607 ntBASIC3.89□□□□□ -1.79
MSI1O43347 AC021382.1-201ENST00000483523 359 ntBASIC3.89□□□□□ -1.79
MSI1O43347 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.89□□□□□ -1.79
MSI1O43347 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
MSI1O43347 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.89□□□□□ -1.79
MSI1O43347 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.89□□□□□ -1.79
MSI1O43347 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.89□□□□□ -1.79
MSI1O43347 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.89□□□□□ -1.79
MSI1O43347 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.89□□□□□ -1.79
MSI1O43347 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.89□□□□□ -1.79
MSI1O43347 AC008011.1-201ENST00000545989 227 ntBASIC3.89□□□□□ -1.79
MSI1O43347 AC087883.1-201ENST00000551882 391 ntBASIC3.89□□□□□ -1.79
MSI1O43347 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.89□□□□□ -1.79
MSI1O43347 MIR4444-1-201ENST00000581696 74 ntBASIC3.89□□□□□ -1.79
MSI1O43347 MIR3158-1-201ENST00000583596 81 ntBASIC3.89□□□□□ -1.79
MSI1O43347 MIR4444-2-201ENST00000584390 74 ntBASIC3.89□□□□□ -1.79
MSI1O43347 AL669831.4-202ENST00000590817 238 ntBASIC3.89□□□□□ -1.79
MSI1O43347 AL049634.3-201ENST00000604968 457 ntBASIC3.89□□□□□ -1.79
MSI1O43347 AL034351.1-201ENST00000605288 668 ntBASIC3.89□□□□□ -1.79
MSI1O43347 AC010680.4-201ENST00000605334 543 ntBASIC3.89□□□□□ -1.79
MSI1O43347 AL355472.4-201ENST00000610233 626 ntBASIC3.89□□□□□ -1.79
MSI1O43347 AC138649.3-201ENST00000622154 254 ntBASIC3.89□□□□□ -1.79
MSI1O43347 AL160394.1-201ENST00000624765 724 ntBASIC3.89□□□□□ -1.79
MSI1O43347 AC110994.2-201ENST00000635481 492 ntBASIC3.89□□□□□ -1.79
MSI1O43347 AC119674.1-207ENST00000641355 633 ntBASIC3.89□□□□□ -1.79
MSI1O43347 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
MSI1O43347 RPS4XP5-202ENST00000449995 1334 ntBASIC3.89□□□□□ -1.79
MSI1O43347 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
MSI1O43347 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MSI1O43347 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.89□□□□□ -1.79
MSI1O43347 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
MSI1O43347 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.89□□□□□ -1.79
MSI1O43347 AL079305.1-201ENST00000623159 3008 ntBASIC3.89□□□□□ -1.79
MSI1O43347 FARSBP1-201ENST00000435808 1778 ntBASIC3.89□□□□□ -1.79
MSI1O43347 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.89□□□□□ -1.79
MSI1O43347 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MSI1O43347 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MSI1O43347 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
MSI1O43347 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
MSI1O43347 GNG5P1-201ENST00000255500 204 ntBASIC3.88□□□□□ -1.79
MSI1O43347 FRG1BP-201ENST00000278882 761 ntBASIC3.88□□□□□ -1.79
MSI1O43347 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
MSI1O43347 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
MSI1O43347 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
MSI1O43347 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.88□□□□□ -1.79
MSI1O43347 MIR548F1-201ENST00000408667 84 ntBASIC3.88□□□□□ -1.79
MSI1O43347 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.88□□□□□ -1.79
MSI1O43347 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.88□□□□□ -1.79
MSI1O43347 BX295541.1-201ENST00000417774 250 ntBASIC3.88□□□□□ -1.79
MSI1O43347 AC092832.1-201ENST00000422934 400 ntBASIC3.88□□□□□ -1.79
MSI1O43347 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.88□□□□□ -1.79
MSI1O43347 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.88□□□□□ -1.79
MSI1O43347 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.88□□□□□ -1.79
MSI1O43347 AL049734.2-201ENST00000441066 616 ntBASIC3.88□□□□□ -1.79
MSI1O43347 RPL23AP33-201ENST00000442301 452 ntBASIC3.88□□□□□ -1.79
MSI1O43347 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.88□□□□□ -1.79
MSI1O43347 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.88□□□□□ -1.79
MSI1O43347 Y_RNA.672-201ENST00000516289 104 ntBASIC3.88□□□□□ -1.79
MSI1O43347 RN7SKP244-201ENST00000516513 307 ntBASIC3.88□□□□□ -1.79
MSI1O43347 RNU6-506P-201ENST00000516553 94 ntBASIC3.88□□□□□ -1.79
MSI1O43347 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.88□□□□□ -1.79
MSI1O43347 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.88□□□□□ -1.79
MSI1O43347 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MSI1O43347 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MSI1O43347 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.88□□□□□ -1.79
MSI1O43347 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.88□□□□□ -1.79
MSI1O43347 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.88□□□□□ -1.79
MSI1O43347 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.88□□□□□ -1.79
MSI1O43347 MIR5187-201ENST00000583479 76 ntBASIC3.88□□□□□ -1.79
MSI1O43347 AC024220.1-201ENST00000603675 484 ntBASIC3.88□□□□□ -1.79
MSI1O43347 RNU1-30P-201ENST00000606575 163 ntBASIC3.88□□□□□ -1.79
MSI1O43347 AF250324.2-201ENST00000608299 610 ntBASIC3.88□□□□□ -1.79
MSI1O43347 AC007684.1-201ENST00000609671 477 ntBASIC3.88□□□□□ -1.79
MSI1O43347 AC136475.10-201ENST00000620253 385 ntBASIC3.88□□□□□ -1.79
MSI1O43347 AC112200.1-201ENST00000625015 234 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms