Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AL353748.2-201ENST00000622148 471 ntBASIC3.91□□□□□ -1.78
TBC1D3FA6NER0 AC244258.1-201ENST00000637553 1071 ntBASIC3.91□□□□□ -1.78
TBC1D3FA6NER0 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
TBC1D3FA6NER0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
TBC1D3FA6NER0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
TBC1D3FA6NER0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.91□□□□□ -1.78
TBC1D3FA6NER0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TBC1D3FA6NER0 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.91□□□□□ -1.78
TBC1D3FA6NER0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.91□□□□□ -1.78
TBC1D3FA6NER0 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
TBC1D3FA6NER0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
TBC1D3FA6NER0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
TBC1D3FA6NER0 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.9□□□□□ -1.78
TBC1D3FA6NER0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.9□□□□□ -1.78
TBC1D3FA6NER0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
TBC1D3FA6NER0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 OR5J1P-201ENST00000313544 939 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 RNA5SP124-201ENST00000362739 110 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 RNU6-335P-201ENST00000364563 113 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 RPL23AP32-201ENST00000395315 459 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 MRPL42P2-201ENST00000403169 426 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 MTND1P21-201ENST00000412991 285 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 ELOCP17-201ENST00000414751 326 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 SSXP9-201ENST00000417503 292 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 TIMM9P1-201ENST00000436122 256 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 AC010587.1-201ENST00000505809 469 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 AC103783.1-201ENST00000520506 373 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 AP004371.1-201ENST00000525240 214 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 COX6CP3-201ENST00000580869 223 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 AC008739.3-201ENST00000603262 127 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 AC007038.2-201ENST00000608095 740 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 OR6R2P-201ENST00000609216 300 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 AC136475.10-201ENST00000620253 385 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 AC068880.5-201ENST00000624331 290 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 OR5AK4P-201ENST00000635912 903 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 MTCO1P9-201ENST00000505577 1534 ntBASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TBC1D3FA6NER0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 RNU5A-8P-201ENST00000364102 114 ntBASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 SNORD74.4-201ENST00000364129 80 ntBASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 RNU6-648P-201ENST00000410190 107 ntBASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 RAD23BP2-201ENST00000416003 1207 ntBASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 AC069157.1-201ENST00000421749 137 ntBASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 AL358934.1-201ENST00000432346 324 ntBASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 RPS6P12-201ENST00000432491 726 ntBASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 AC079448.1-201ENST00000449377 373 ntBASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 RBM43P1-201ENST00000476891 1081 ntBASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 RPS3AP50-201ENST00000487064 803 ntBASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 KCTD9P5-201ENST00000504141 1170 ntBASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 HMGB1P22-201ENST00000505315 124 ntBASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 IGKV2-38-201ENST00000517443 247 ntBASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.89□□□□□ -1.79
TBC1D3FA6NER0 AC022695.1-201ENST00000522089 237 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms