Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HCN4Q9Y3Q4 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HCN4Q9Y3Q4 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 Y_RNA.288-201ENST00000364854 92 ntBASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 MIR134-201ENST00000385258 73 ntBASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 MYL6P5-201ENST00000412707 459 ntBASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 AC000374.1-201ENST00000434698 1745 ntBASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 AC011816.1-201ENST00000441346 546 ntBASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 AC008571.1-201ENST00000467232 300 ntBASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 RPS23P3-201ENST00000470993 430 ntBASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 RPL7P23-201ENST00000493874 747 ntBASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 AC009901.1-201ENST00000506703 541 ntBASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 AC131281.1-201ENST00000522984 164 ntBASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 AC127381.1-201ENST00000555979 939 ntBASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 AC025857.2-201ENST00000602711 238 ntBASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 AC006254.3-201ENST00000603353 884 ntBASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 AL031176.1-201ENST00000604554 466 ntBASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.61□□□□□ -1.51
HCN4Q9Y3Q4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 Y_RNA.106-201ENST00000363189 100 ntBASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 RN7SKP145-201ENST00000363291 303 ntBASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 RNU6-306P-201ENST00000384617 107 ntBASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 AL078599.1-201ENST00000402075 293 ntBASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 PGBD4P6-201ENST00000421501 610 ntBASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 RPL12P34-201ENST00000424532 479 ntBASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 AC097713.2-201ENST00000430199 356 ntBASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 RPL23AP50-201ENST00000434149 455 ntBASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 RHOT1P3-201ENST00000436571 331 ntBASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 DYNLT3P2-201ENST00000442517 295 ntBASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 AL353752.1-201ENST00000454946 260 ntBASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 RNU6-941P-201ENST00000516346 108 ntBASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 IGKV2D-36-201ENST00000518643 226 ntBASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 AC024940.3-201ENST00000538551 316 ntBASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 AC023157.2-201ENST00000540596 141 ntBASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 AC109583.2-201ENST00000617367 129 ntBASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 HSPA8P4-201ENST00000511877 1920 ntBASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
HCN4Q9Y3Q4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.59□□□□□ -1.51
HCN4Q9Y3Q4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HCN4Q9Y3Q4 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HCN4Q9Y3Q4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HCN4Q9Y3Q4 AC239868.2-201ENST00000564237 4527 ntBASIC5.59□□□□□ -1.51
HCN4Q9Y3Q4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HCN4Q9Y3Q4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HCN4Q9Y3Q4 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HCN4Q9Y3Q4 AL353796.1-201ENST00000561542 3241 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms