Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
SENP3Q9H4L4 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC10.04□□□□□ -0.8
SENP3Q9H4L4 RN7SKP69-201ENST00000365390 305 ntBASIC10.04□□□□□ -0.8
SENP3Q9H4L4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC10.04□□□□□ -0.8
SENP3Q9H4L4 MIR1265-201ENST00000408444 86 ntBASIC10.04□□□□□ -0.8
SENP3Q9H4L4 RN7SKP267-201ENST00000410381 285 ntBASIC10.04□□□□□ -0.8
SENP3Q9H4L4 AC007919.1-201ENST00000429380 217 ntBASIC10.04□□□□□ -0.8
SENP3Q9H4L4 AL359073.1-201ENST00000448036 403 ntBASIC10.04□□□□□ -0.8
SENP3Q9H4L4 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC10.04□□□□□ -0.8
SENP3Q9H4L4 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC10.04□□□□□ -0.8
SENP3Q9H4L4 RN7SL230P-201ENST00000580835 303 ntBASIC10.04□□□□□ -0.8
SENP3Q9H4L4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC10.04□□□□□ -0.8
SENP3Q9H4L4 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC10.04□□□□□ -0.8
SENP3Q9H4L4 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC10.04□□□□□ -0.8
SENP3Q9H4L4 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC10.04□□□□□ -0.8
SENP3Q9H4L4 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC10.04□□□□□ -0.8
SENP3Q9H4L4 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC10.04□□□□□ -0.8
SENP3Q9H4L4 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SENP3Q9H4L4 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SENP3Q9H4L4 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC10.04□□□□□ -0.8
SENP3Q9H4L4 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SENP3Q9H4L4 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC10.03□□□□□ -0.8
SENP3Q9H4L4 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
SENP3Q9H4L4 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SENP3Q9H4L4 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SENP3Q9H4L4 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SENP3Q9H4L4 MAPK10-347ENST00000641762 2856 ntBASIC10.03□□□□□ -0.8
SENP3Q9H4L4 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SENP3Q9H4L4 RN7SKP107-201ENST00000364157 290 ntBASIC10.03□□□□□ -0.8
SENP3Q9H4L4 RN7SKP206-201ENST00000410823 293 ntBASIC10.03□□□□□ -0.8
SENP3Q9H4L4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC10.03□□□□□ -0.8
SENP3Q9H4L4 CYCSP10-201ENST00000417973 294 ntBASIC10.03□□□□□ -0.8
SENP3Q9H4L4 CYCSP51-201ENST00000443545 318 ntBASIC10.03□□□□□ -0.8
SENP3Q9H4L4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC10.03□□□□□ -0.8
SENP3Q9H4L4 SCARNA6-201ENST00000515982 265 ntBASIC10.03□□□□□ -0.8
SENP3Q9H4L4 IGLVI-42-201ENST00000522485 381 ntBASIC10.03□□□□□ -0.8
SENP3Q9H4L4 HMGN2P36-201ENST00000529541 409 ntBASIC10.03□□□□□ -0.8
SENP3Q9H4L4 MIR4502-201ENST00000580432 81 ntBASIC10.03□□□□□ -0.8
SENP3Q9H4L4 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
SENP3Q9H4L4 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SENP3Q9H4L4 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
SENP3Q9H4L4 AC008555.1-201ENST00000561778 2757 ntBASIC10.03□□□□□ -0.8
SENP3Q9H4L4 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC10.02□□□□□ -0.8
SENP3Q9H4L4 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
SENP3Q9H4L4 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 RNU6-509P-201ENST00000363519 107 ntBASIC10.02□□□□□ -0.81
SENP3Q9H4L4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 RN7SL177P-201ENST00000476596 299 ntBASIC10.02□□□□□ -0.81
SENP3Q9H4L4 AC006539.1-201ENST00000481419 501 ntBASIC10.02□□□□□ -0.81
SENP3Q9H4L4 RN7SL284P-201ENST00000498823 275 ntBASIC10.02□□□□□ -0.81
SENP3Q9H4L4 AC083906.5-201ENST00000503722 328 ntBASIC10.02□□□□□ -0.81
SENP3Q9H4L4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 MIR3163-201ENST00000581592 73 ntBASIC10.02□□□□□ -0.81
SENP3Q9H4L4 AL138895.2-201ENST00000603019 178 ntBASIC10.02□□□□□ -0.81
SENP3Q9H4L4 AP001052.1-201ENST00000626421 99 ntBASIC10.02□□□□□ -0.81
SENP3Q9H4L4 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
SENP3Q9H4L4 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SENP3Q9H4L4 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SENP3Q9H4L4 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
SENP3Q9H4L4 Y_RNA.66-201ENST00000362862 102 ntBASIC10.01□□□□□ -0.81
SENP3Q9H4L4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC10.01□□□□□ -0.81
SENP3Q9H4L4 RPL36AP10-201ENST00000421785 322 ntBASIC10.01□□□□□ -0.81
SENP3Q9H4L4 ENPP7P11-201ENST00000505915 627 ntBASIC10.01□□□□□ -0.81
SENP3Q9H4L4 Pinc.1-201ENST00000616452 154 ntBASIC10.01□□□□□ -0.81
SENP3Q9H4L4 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SENP3Q9H4L4 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SENP3Q9H4L4 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC10.01□□□□□ -0.81
SENP3Q9H4L4 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
SENP3Q9H4L4 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
SENP3Q9H4L4 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
SENP3Q9H4L4 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC10□□□□□ -0.81
SENP3Q9H4L4 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
SENP3Q9H4L4 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
SENP3Q9H4L4 RNU6-1292P-201ENST00000383856 107 ntBASIC10□□□□□ -0.81
SENP3Q9H4L4 U3.26-201ENST00000391236 204 ntBASIC10□□□□□ -0.81
SENP3Q9H4L4 AL590635.1-201ENST00000406314 586 ntBASIC10□□□□□ -0.81
SENP3Q9H4L4 MIR1250-201ENST00000408098 113 ntBASIC10□□□□□ -0.81
SENP3Q9H4L4 RNA5SP504-201ENST00000410676 117 ntBASIC10□□□□□ -0.81
SENP3Q9H4L4 GAPDHP59-201ENST00000435908 267 ntBASIC10□□□□□ -0.81
SENP3Q9H4L4 HMGN2P47-201ENST00000559378 272 ntBASIC10□□□□□ -0.81
SENP3Q9H4L4 AC008521.2-201ENST00000591021 259 ntBASIC10□□□□□ -0.81
SENP3Q9H4L4 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SENP3Q9H4L4 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms