Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NDC1Q9BTX1 Y_RNA.67-201ENST00000362870 100 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 RNU6-39P-201ENST00000384344 107 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 SNORA70E-201ENST00000384492 135 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 MIR659-201ENST00000384963 97 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 MIR195-201ENST00000385194 87 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 RN7SKP247-201ENST00000411094 308 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 MTCYBP8-201ENST00000422855 651 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 CHIAP3-201ENST00000423668 1133 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.29□□□□□ -1.72
NDC1Q9BTX1 RSL24D1P6-201ENST00000426934 401 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 ELOCP18-201ENST00000434209 337 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 RPS20P5-201ENST00000434808 360 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 RPL21P89-201ENST00000444021 467 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 PTMAP3-201ENST00000447474 330 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 AC073415.1-201ENST00000449240 153 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 RPL23AP24-201ENST00000458203 385 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 RPL7P19-201ENST00000469948 618 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 DEFB109F-201ENST00000491870 277 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NDC1Q9BTX1 HMGB1P19-201ENST00000517578 577 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.29□□□□□ -1.72
NDC1Q9BTX1 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.29□□□□□ -1.72
NDC1Q9BTX1 AP000857.1-201ENST00000532151 543 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 AC087241.2-201ENST00000535801 324 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.29□□□□□ -1.72
NDC1Q9BTX1 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.29□□□□□ -1.72
NDC1Q9BTX1 AC068831.4-201ENST00000556118 109 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.29□□□□□ -1.72
NDC1Q9BTX1 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.29□□□□□ -1.72
NDC1Q9BTX1 AP001029.3-201ENST00000588063 596 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 AL590392.1-201ENST00000604960 446 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.29□□□□□ -1.72
NDC1Q9BTX1 AC005086.4-201ENST00000623065 213 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 AC019278.1-201ENST00000623516 479 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.29□□□□□ -1.72
NDC1Q9BTX1 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.29□□□□□ -1.72
NDC1Q9BTX1 AL645937.1-201ENST00000641739 1652 ntBASIC4.29□□□□□ -1.72
NDC1Q9BTX1 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NDC1Q9BTX1 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NDC1Q9BTX1 MTND4P35-201ENST00000604257 1375 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.28□□□□□ -1.72
NDC1Q9BTX1 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NDC1Q9BTX1 RNU6-989P-201ENST00000362756 107 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 Y_RNA.162-201ENST00000363683 102 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 U3.11-201ENST00000364476 212 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 Y_RNA.367-201ENST00000365544 101 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 RNU4-48P-201ENST00000365559 182 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NDC1Q9BTX1 RNA5SP372-201ENST00000390836 115 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 RNU6-510P-201ENST00000391239 108 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NDC1Q9BTX1 MIR921-201ENST00000401133 56 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 AL590004.1-201ENST00000405321 300 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 RNU4-25P-201ENST00000410569 230 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 MTND3P8-201ENST00000412909 339 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 AC009161.1-201ENST00000417306 376 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 USP9YP20-201ENST00000419224 558 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NDC1Q9BTX1 AC005517.2-201ENST00000424673 553 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 DUTP6-201ENST00000425573 462 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 AL732292.1-201ENST00000426692 226 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 OR4K11P-201ENST00000431829 904 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 IFNA20P-201ENST00000436840 528 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 RPS17P13-201ENST00000448974 407 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 AC012671.1-201ENST00000451912 203 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 IFNWP4-201ENST00000453148 294 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.28□□□□□ -1.72
NDC1Q9BTX1 AC022795.1-201ENST00000473808 480 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 RPL23AP65-201ENST00000475608 468 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 RN7SL41P-201ENST00000476144 297 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 RN7SL810P-201ENST00000493031 276 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.28□□□□□ -1.72
NDC1Q9BTX1 AC114797.1-201ENST00000514003 728 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.28□□□□□ -1.72
NDC1Q9BTX1 RN7SKP122-201ENST00000515923 296 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 SNORD27.1-201ENST00000516319 72 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.28□□□□□ -1.72
NDC1Q9BTX1 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.28□□□□□ -1.72
NDC1Q9BTX1 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.28□□□□□ -1.72
NDC1Q9BTX1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.28□□□□□ -1.72
NDC1Q9BTX1 AC068446.3-201ENST00000555285 382 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.28□□□□□ -1.72
NDC1Q9BTX1 AC015912.2-201ENST00000571053 181 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 OR4K8P-201ENST00000578842 1048 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 AC091178.1-203ENST00000584586 279 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 AL669831.4-202ENST00000590817 238 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 HMGB2P1-201ENST00000591146 634 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.28□□□□□ -1.72
NDC1Q9BTX1 Y_RNA.812-201ENST00000610788 101 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 Y_RNA.784-201ENST00000613803 101 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 AC093913.1-201ENST00000614178 329 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 Y_RNA.787-201ENST00000616522 101 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 Y_RNA.780-201ENST00000617336 101 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 Y_RNA.801-201ENST00000619005 101 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.28□□□□□ -1.72
NDC1Q9BTX1 AL161637.1-201ENST00000622380 412 ntBASIC4.28□□□□□ -1.72
NDC1Q9BTX1 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms