Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RN7SL558P-201ENST00000497468 299 ntBASIC5.42□□□□□ -1.54
SYNGAP1Q96PV0 RPS27P27-201ENST00000498779 255 ntBASIC5.42□□□□□ -1.54
SYNGAP1Q96PV0 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.42□□□□□ -1.54
SYNGAP1Q96PV0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.42□□□□□ -1.54
SYNGAP1Q96PV0 RNU6-566P-201ENST00000516790 107 ntBASIC5.42□□□□□ -1.54
SYNGAP1Q96PV0 AC022634.1-201ENST00000520765 532 ntBASIC5.42□□□□□ -1.54
SYNGAP1Q96PV0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.42□□□□□ -1.54
SYNGAP1Q96PV0 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.42□□□□□ -1.54
SYNGAP1Q96PV0 AP000889.2-201ENST00000532684 490 ntBASIC5.42□□□□□ -1.54
SYNGAP1Q96PV0 CYCSP29-201ENST00000533731 318 ntBASIC5.42□□□□□ -1.54
SYNGAP1Q96PV0 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.42□□□□□ -1.54
SYNGAP1Q96PV0 SNORA74C-1-201ENST00000580726 201 ntBASIC5.42□□□□□ -1.54
SYNGAP1Q96PV0 COX6CP3-201ENST00000580869 223 ntBASIC5.42□□□□□ -1.54
SYNGAP1Q96PV0 AC083806.3-201ENST00000614016 455 ntBASIC5.42□□□□□ -1.54
SYNGAP1Q96PV0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.42□□□□□ -1.54
SYNGAP1Q96PV0 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.42□□□□□ -1.54
SYNGAP1Q96PV0 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.42□□□□□ -1.54
SYNGAP1Q96PV0 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.42□□□□□ -1.54
SYNGAP1Q96PV0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SYNGAP1Q96PV0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.42□□□□□ -1.54
SYNGAP1Q96PV0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 RNA5SP447-201ENST00000363749 119 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 RNA5SP28-201ENST00000363841 119 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 MIR568-201ENST00000385036 95 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 SSXP10-201ENST00000402595 565 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 AL592114.1-201ENST00000403842 483 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 RN7SKP267-201ENST00000410381 285 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 AC009965.2-201ENST00000425328 970 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 RPEP3-201ENST00000425462 676 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 USP9YP16-201ENST00000430287 407 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 TXNP1-201ENST00000441872 371 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 AL354710.1-201ENST00000453641 246 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 USP9YP23-201ENST00000455085 407 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 RPL23AP11-201ENST00000475260 469 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 RPL21P6-201ENST00000479171 504 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 AC068305.1-201ENST00000497406 726 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 MTCYBP40-201ENST00000509390 1135 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 RN7SKP295-201ENST00000517264 153 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 DEFB109D-201ENST00000529497 240 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 AC105129.1-201ENST00000560250 297 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 MIR4703-201ENST00000577728 79 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 AL160281.1-201ENST00000605307 311 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 AC133104.2-201ENST00000615272 193 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 AC074140.1-201ENST00000621617 208 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 MTND5P19-201ENST00000424872 1794 ntBASIC5.41□□□□□ -1.54
SYNGAP1Q96PV0 SMG1P4-204ENST00000523028 4131 ntBASIC5.4□□□□□ -1.54
SYNGAP1Q96PV0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.4□□□□□ -1.54
SYNGAP1Q96PV0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
SYNGAP1Q96PV0 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SYNGAP1Q96PV0 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SYNGAP1Q96PV0 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SYNGAP1Q96PV0 RNU6-179P-201ENST00000363350 107 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 Y_RNA.452-201ENST00000384202 108 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 MIR483-201ENST00000385070 76 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AL358176.3-201ENST00000420757 454 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AL590609.2-201ENST00000421430 368 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 RPL31P12-201ENST00000422587 358 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AL732292.1-201ENST00000426692 226 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 FHP1-201ENST00000442741 703 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 BTF3P6-201ENST00000448054 499 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 MTND1P9-201ENST00000453775 944 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AC104308.1-201ENST00000454621 333 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 RNU7-180P-201ENST00000459240 63 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AC008481.1-201ENST00000463278 396 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AC108751.5-201ENST00000492880 1336 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AC073073.1-201ENST00000493920 463 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AC098591.2-201ENST00000510152 315 ntBASIC5.4□□□□□ -1.55
SYNGAP1Q96PV0 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms