Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RPS11P1-201ENST00000451072 473 ntBASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 PPIAP27-201ENST00000453800 265 ntBASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 RPL7P47-201ENST00000497299 556 ntBASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 RNU6-496P-201ENST00000516145 99 ntBASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 AC090022.1-201ENST00000546569 311 ntBASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 AC002310.3-201ENST00000569728 723 ntBASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 AL450472.3-201ENST00000615578 367 ntBASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC116Q8IYX3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 AC007785.2-201ENST00000598627 1916 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 AC083843.2-201ENST00000568248 6253 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 Y_RNA.8-201ENST00000362353 102 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 Y_RNA.44-201ENST00000362676 108 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 RNU6-290P-201ENST00000365212 101 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 RNY4P28-201ENST00000365281 93 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 RN7SKP187-201ENST00000365536 330 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 RNY3P4-201ENST00000384428 101 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 RPL12P16-201ENST00000431098 498 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 GAPDHP58-201ENST00000438477 1006 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 PIGFP3-201ENST00000441918 722 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 RANP8-201ENST00000444720 713 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 BX276092.4-201ENST00000452056 248 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 AC068228.1-201ENST00000461723 211 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 HIGD1AP3-201ENST00000515857 278 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 RNA5SP340-201ENST00000517132 107 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 RAB9BP1-201ENST00000519581 626 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 AL590705.4-201ENST00000532209 134 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 MIR3144-201ENST00000579460 79 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 AC009314.1-201ENST00000603871 304 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 MIR6809-201ENST00000612189 116 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 AL590240.4-201ENST00000616908 390 ntBASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.54□□□□□ -1.52
CCDC116Q8IYX3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 RN7SKP128-201ENST00000364270 303 ntBASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 RN7SKP269-201ENST00000365545 319 ntBASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 Y_RNA.534-201ENST00000384599 112 ntBASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 RNU6-1179P-201ENST00000384667 107 ntBASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 MIR190B-201ENST00000401119 79 ntBASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 AL079342.1-201ENST00000401460 267 ntBASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 RNU6-735P-201ENST00000410612 107 ntBASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 AC093655.2-201ENST00000425735 631 ntBASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 AC023141.8-201ENST00000442554 208 ntBASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 U8.21-201ENST00000459536 136 ntBASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 AC079905.1-201ENST00000549280 475 ntBASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 BDH2P1-201ENST00000602288 736 ntBASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 SNORD91B-202ENST00000608459 222 ntBASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 MIR8076-201ENST00000611401 83 ntBASIC5.53□□□□□ -1.52
CCDC116Q8IYX3 U6.106-201ENST00000636360 105 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms