Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF20Q5VTR2 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
RNF20Q5VTR2 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.44
RNF20Q5VTR2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RNF20Q5VTR2 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
RNF20Q5VTR2 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 MTND5P27-201ENST00000428871 1720 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 RNU6-874P-201ENST00000362390 105 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 Y_RNA.210-201ENST00000364161 110 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 Y_RNA.424-201ENST00000384063 103 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 RNU11-4P-201ENST00000391149 133 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 AL391361.1-201ENST00000405580 489 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 RN7SKP16-201ENST00000410180 299 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 RN7SKP126-201ENST00000411143 300 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 UBE2FP1-201ENST00000416536 447 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 AC243428.1-201ENST00000421099 264 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 AC104333.2-201ENST00000422630 192 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 ARL5AP4-201ENST00000430731 512 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 RPL35AP22-201ENST00000436855 335 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 RPL21P2-201ENST00000440049 481 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 RPS3AP41-201ENST00000462701 778 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 AP001086.1-201ENST00000494882 321 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 RNU4-77P-201ENST00000516692 156 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 AC063949.1-201ENST00000552900 865 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 HSBP1P1-201ENST00000555205 166 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 AC011494.1-201ENST00000596454 237 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 SNORD58B-201ENST00000607313 66 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 AP001642.1-201ENST00000624727 2117 ntBASIC6.08□□□□□ -1.44
RNF20Q5VTR2 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF20Q5VTR2 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.07□□□□□ -1.44
RNF20Q5VTR2 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 RNU6-1059P-201ENST00000363752 98 ntBASIC6.07□□□□□ -1.44
RNF20Q5VTR2 RNU6-266P-201ENST00000364225 107 ntBASIC6.07□□□□□ -1.44
RNF20Q5VTR2 SMIM11P1-201ENST00000369586 178 ntBASIC6.07□□□□□ -1.44
RNF20Q5VTR2 AL109755.1-201ENST00000401791 649 ntBASIC6.07□□□□□ -1.44
RNF20Q5VTR2 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 RPL21P24-201ENST00000413752 448 ntBASIC6.07□□□□□ -1.44
RNF20Q5VTR2 MRPS18CP6-201ENST00000423587 223 ntBASIC6.07□□□□□ -1.44
RNF20Q5VTR2 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 PPIAP3-201ENST00000450588 505 ntBASIC6.07□□□□□ -1.44
RNF20Q5VTR2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 AL353752.1-201ENST00000454946 260 ntBASIC6.07□□□□□ -1.44
RNF20Q5VTR2 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 AC087884.1-201ENST00000469738 328 ntBASIC6.07□□□□□ -1.44
RNF20Q5VTR2 RN7SL432P-201ENST00000484057 298 ntBASIC6.07□□□□□ -1.44
RNF20Q5VTR2 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 AC114801.2-201ENST00000503825 781 ntBASIC6.07□□□□□ -1.44
RNF20Q5VTR2 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 AC105031.1-201ENST00000518550 476 ntBASIC6.07□□□□□ -1.44
RNF20Q5VTR2 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 AL355297.3-201ENST00000604082 446 ntBASIC6.07□□□□□ -1.44
RNF20Q5VTR2 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 EIF3FP1-201ENST00000613970 806 ntBASIC6.07□□□□□ -1.44
RNF20Q5VTR2 AC123768.4-201ENST00000616244 701 ntBASIC6.07□□□□□ -1.44
RNF20Q5VTR2 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 AC000374.1-201ENST00000434698 1745 ntBASIC6.07□□□□□ -1.44
RNF20Q5VTR2 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
RNF20Q5VTR2 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms