Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.58□□□□□ -2
CXCL12P48061 AC090116.1-201ENST00000615679 446 ntBASIC2.58□□□□□ -2
CXCL12P48061 AP003476.1-201ENST00000623984 516 ntBASIC2.58□□□□□ -2
CXCL12P48061 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.58□□□□□ -2
CXCL12P48061 AC106858.1-201ENST00000637497 429 ntBASIC2.58□□□□□ -2
CXCL12P48061 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.58□□□□□ -2
CXCL12P48061 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CXCL12P48061 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.58□□□□□ -2
CXCL12P48061 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CXCL12P48061 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.57□□□□□ -2
CXCL12P48061 RNU6-629P-201ENST00000384061 103 ntBASIC2.57□□□□□ -2
CXCL12P48061 MIR181A2-201ENST00000384863 110 ntBASIC2.57□□□□□ -2
CXCL12P48061 AL512633.1-201ENST00000399931 655 ntBASIC2.57□□□□□ -2
CXCL12P48061 AL133264.1-201ENST00000407157 562 ntBASIC2.57□□□□□ -2
CXCL12P48061 RNU2-71P-201ENST00000411395 189 ntBASIC2.57□□□□□ -2
CXCL12P48061 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.57□□□□□ -2
CXCL12P48061 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.57□□□□□ -2
CXCL12P48061 GTF2IP23-201ENST00000423746 351 ntBASIC2.57□□□□□ -2
CXCL12P48061 C1DP1-201ENST00000426049 402 ntBASIC2.57□□□□□ -2
CXCL12P48061 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.57□□□□□ -2
CXCL12P48061 AL356320.1-201ENST00000429616 163 ntBASIC2.57□□□□□ -2
CXCL12P48061 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.57□□□□□ -2
CXCL12P48061 SETP8-201ENST00000435341 628 ntBASIC2.57□□□□□ -2
CXCL12P48061 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.57□□□□□ -2
CXCL12P48061 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.57□□□□□ -2
CXCL12P48061 SYPL1P1-201ENST00000473622 768 ntBASIC2.57□□□□□ -2
CXCL12P48061 DYNLL1P6-201ENST00000503440 264 ntBASIC2.57□□□□□ -2
CXCL12P48061 AC084024.2-201ENST00000503480 791 ntBASIC2.57□□□□□ -2
CXCL12P48061 SUMO2P5-201ENST00000506790 245 ntBASIC2.57□□□□□ -2
CXCL12P48061 KLHL2P1-201ENST00000508691 521 ntBASIC2.57□□□□□ -2
CXCL12P48061 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.57□□□□□ -2
CXCL12P48061 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.57□□□□□ -2
CXCL12P48061 RN7SKP244-201ENST00000516513 307 ntBASIC2.57□□□□□ -2
CXCL12P48061 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.57□□□□□ -2
CXCL12P48061 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.57□□□□□ -2
CXCL12P48061 AC019227.1-201ENST00000526902 510 ntBASIC2.57□□□□□ -2
CXCL12P48061 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.57□□□□□ -2
CXCL12P48061 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.57□□□□□ -2
CXCL12P48061 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.57□□□□□ -2
CXCL12P48061 BNIP3P31-201ENST00000604515 566 ntBASIC2.57□□□□□ -2
CXCL12P48061 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.57□□□□□ -2
CXCL12P48061 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.57□□□□□ -2
CXCL12P48061 AL138955.1-201ENST00000622881 1040 ntBASIC2.57□□□□□ -2
CXCL12P48061 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.57□□□□□ -2
CXCL12P48061 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.57□□□□□ -2
CXCL12P48061 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CXCL12P48061 AC130650.2-201ENST00000618736 2403 ntBASIC2.57□□□□□ -2
CXCL12P48061 AC002546.1-201ENST00000588041 2504 ntBASIC2.57□□□□□ -2
CXCL12P48061 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.56□□□□□ -2
CXCL12P48061 RNU6-989P-201ENST00000362756 107 ntBASIC2.56□□□□□ -2
CXCL12P48061 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CXCL12P48061 RNU6-339P-201ENST00000384310 107 ntBASIC2.56□□□□□ -2
CXCL12P48061 MIR518C-201ENST00000384822 101 ntBASIC2.56□□□□□ -2
CXCL12P48061 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.56□□□□□ -2
CXCL12P48061 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.56□□□□□ -2
CXCL12P48061 RNA5SP56-201ENST00000410277 118 ntBASIC2.56□□□□□ -2
CXCL12P48061 RN7SKP123-201ENST00000410732 291 ntBASIC2.56□□□□□ -2
CXCL12P48061 AC007064.1-201ENST00000412238 351 ntBASIC2.56□□□□□ -2
CXCL12P48061 RPS7P9-201ENST00000414704 586 ntBASIC2.56□□□□□ -2
CXCL12P48061 USP9YP20-201ENST00000419224 558 ntBASIC2.56□□□□□ -2
CXCL12P48061 SDCBPP3-201ENST00000419629 891 ntBASIC2.56□□□□□ -2
CXCL12P48061 YPEL5P1-201ENST00000419731 367 ntBASIC2.56□□□□□ -2
CXCL12P48061 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.56□□□□□ -2
CXCL12P48061 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.56□□□□□ -2
CXCL12P48061 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.56□□□□□ -2
CXCL12P48061 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.56□□□□□ -2
CXCL12P48061 IFNA11P-201ENST00000446352 526 ntBASIC2.56□□□□□ -2
CXCL12P48061 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
CXCL12P48061 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.56□□□□□ -2
CXCL12P48061 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.56□□□□□ -2
CXCL12P48061 AC093278.1-201ENST00000494700 600 ntBASIC2.56□□□□□ -2
CXCL12P48061 AC008427.1-201ENST00000503102 655 ntBASIC2.56□□□□□ -2
CXCL12P48061 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.56□□□□□ -2
CXCL12P48061 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.56□□□□□ -2
CXCL12P48061 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.56□□□□□ -2
CXCL12P48061 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.56□□□□□ -2
CXCL12P48061 AC239860.2-201ENST00000525886 270 ntBASIC2.56□□□□□ -2
CXCL12P48061 MTCO3P15-201ENST00000526563 574 ntBASIC2.56□□□□□ -2
CXCL12P48061 LSM6P2-201ENST00000552208 177 ntBASIC2.56□□□□□ -2
CXCL12P48061 AC093519.1-201ENST00000566109 298 ntBASIC2.56□□□□□ -2
CXCL12P48061 MAGOH2P-202ENST00000584384 429 ntBASIC2.56□□□□□ -2
CXCL12P48061 AL669831.4-202ENST00000590817 238 ntBASIC2.56□□□□□ -2
CXCL12P48061 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.56□□□□□ -2
CXCL12P48061 KC877982.1-201ENST00000602313 470 ntBASIC2.56□□□□□ -2
CXCL12P48061 AP003973.1-201ENST00000604639 691 ntBASIC2.56□□□□□ -2
CXCL12P48061 AC005046.1-201ENST00000608515 625 ntBASIC2.56□□□□□ -2
CXCL12P48061 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.56□□□□□ -2
CXCL12P48061 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
CXCL12P48061 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.56□□□□□ -2
CXCL12P48061 AC010733.2-201ENST00000589496 5702 ntBASIC2.56□□□□□ -2
CXCL12P48061 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
CXCL12P48061 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CXCL12P48061 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.56□□□□□ -2
CXCL12P48061 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CXCL12P48061 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CXCL12P48061 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CXCL12P48061 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.55□□□□□ -2
CXCL12P48061 RNU6-251P-201ENST00000363235 104 ntBASIC2.55□□□□□ -2
CXCL12P48061 RNU6-236P-201ENST00000363886 106 ntBASIC2.55□□□□□ -2
CXCL12P48061 RNU6-335P-201ENST00000364563 113 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms