Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.74□□□□□ -1.81
USP8P40818 TRBV26-201ENST00000456572 344 ntBASIC3.74□□□□□ -1.81
USP8P40818 SNORD105B-201ENST00000458770 79 ntBASIC3.74□□□□□ -1.81
USP8P40818 RNU6-956P-201ENST00000458868 103 ntBASIC3.74□□□□□ -1.81
USP8P40818 RN7SL542P-201ENST00000467147 294 ntBASIC3.74□□□□□ -1.81
USP8P40818 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.74□□□□□ -1.81
USP8P40818 AC017015.1-201ENST00000477387 286 ntBASIC3.74□□□□□ -1.81
USP8P40818 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.74□□□□□ -1.81
USP8P40818 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.74□□□□□ -1.81
USP8P40818 SNORA64.4-201ENST00000516632 81 ntBASIC3.74□□□□□ -1.81
USP8P40818 SNORA70.19-201ENST00000516717 90 ntBASIC3.74□□□□□ -1.81
USP8P40818 TRMT10BP1-201ENST00000519377 943 ntBASIC3.74□□□□□ -1.81
USP8P40818 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.74□□□□□ -1.81
USP8P40818 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.74□□□□□ -1.81
USP8P40818 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.74□□□□□ -1.81
USP8P40818 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.74□□□□□ -1.81
USP8P40818 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.74□□□□□ -1.81
USP8P40818 AC074029.1-201ENST00000552531 1044 ntBASIC3.74□□□□□ -1.81
USP8P40818 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.74□□□□□ -1.81
USP8P40818 AP001004.1-201ENST00000582468 324 ntBASIC3.74□□□□□ -1.81
USP8P40818 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.74□□□□□ -1.81
USP8P40818 AC025588.3-201ENST00000604182 274 ntBASIC3.74□□□□□ -1.81
USP8P40818 RNU6-88P-201ENST00000606801 100 ntBASIC3.74□□□□□ -1.81
USP8P40818 AP000254.1-201ENST00000609934 520 ntBASIC3.74□□□□□ -1.81
USP8P40818 CR392039.5-201ENST00000623201 510 ntBASIC3.74□□□□□ -1.81
USP8P40818 AC092656.1-203ENST00000624134 423 ntBASIC3.74□□□□□ -1.81
USP8P40818 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USP8P40818 DDX43P2-201ENST00000604753 1354 ntBASIC3.74□□□□□ -1.81
USP8P40818 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
USP8P40818 GDI2P1-201ENST00000429312 1336 ntBASIC3.73□□□□□ -1.81
USP8P40818 AC130650.2-201ENST00000618736 2403 ntBASIC3.73□□□□□ -1.81
USP8P40818 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USP8P40818 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
USP8P40818 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
USP8P40818 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
USP8P40818 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
USP8P40818 RNU6-462P-201ENST00000362659 105 ntBASIC3.73□□□□□ -1.81
USP8P40818 RNU6-623P-201ENST00000363143 105 ntBASIC3.73□□□□□ -1.81
USP8P40818 Y_RNA.126-201ENST00000363382 111 ntBASIC3.73□□□□□ -1.81
USP8P40818 RNU6-501P-201ENST00000364072 100 ntBASIC3.73□□□□□ -1.81
USP8P40818 Y_RNA.359-201ENST00000365498 102 ntBASIC3.73□□□□□ -1.81
USP8P40818 OR5H15-201ENST00000383696 930 ntBASIC3.73□□□□□ -1.81
USP8P40818 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.73□□□□□ -1.81
USP8P40818 RPL36AP36-201ENST00000418616 301 ntBASIC3.73□□□□□ -1.81
USP8P40818 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.73□□□□□ -1.81
USP8P40818 AP000907.1-201ENST00000428428 510 ntBASIC3.73□□□□□ -1.81
USP8P40818 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USP8P40818 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.73□□□□□ -1.81
USP8P40818 AC073063.1-201ENST00000434352 607 ntBASIC3.73□□□□□ -1.81
USP8P40818 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.73□□□□□ -1.81
USP8P40818 MTND4P6-201ENST00000438297 472 ntBASIC3.73□□□□□ -1.81
USP8P40818 LSM1P1-201ENST00000438629 273 ntBASIC3.73□□□□□ -1.81
USP8P40818 COX6CP2-201ENST00000444980 225 ntBASIC3.73□□□□□ -1.81
USP8P40818 RPL29P29-201ENST00000448725 423 ntBASIC3.73□□□□□ -1.81
USP8P40818 BX322784.1-201ENST00000455793 1077 ntBASIC3.73□□□□□ -1.81
USP8P40818 PLGLA-201ENST00000465668 449 ntBASIC3.73□□□□□ -1.81
USP8P40818 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USP8P40818 HMGB1P36-201ENST00000487709 576 ntBASIC3.73□□□□□ -1.81
USP8P40818 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.73□□□□□ -1.81
USP8P40818 MTND3P5-201ENST00000512798 333 ntBASIC3.73□□□□□ -1.81
USP8P40818 AC104057.1-201ENST00000515547 497 ntBASIC3.73□□□□□ -1.81
USP8P40818 RN7SKP244-201ENST00000516513 307 ntBASIC3.73□□□□□ -1.81
USP8P40818 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.73□□□□□ -1.81
USP8P40818 AC013828.2-201ENST00000532487 235 ntBASIC3.73□□□□□ -1.81
USP8P40818 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.73□□□□□ -1.81
USP8P40818 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.73□□□□□ -1.81
USP8P40818 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.73□□□□□ -1.81
USP8P40818 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.73□□□□□ -1.81
USP8P40818 AGGF1P4-201ENST00000568249 801 ntBASIC3.73□□□□□ -1.81
USP8P40818 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.73□□□□□ -1.81
USP8P40818 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.73□□□□□ -1.81
USP8P40818 BNIP3P23-201ENST00000599655 511 ntBASIC3.73□□□□□ -1.81
USP8P40818 AL139286.2-201ENST00000606838 396 ntBASIC3.73□□□□□ -1.81
USP8P40818 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.73□□□□□ -1.81
USP8P40818 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.73□□□□□ -1.81
USP8P40818 AL034408.1-202ENST00000636088 415 ntBASIC3.73□□□□□ -1.81
USP8P40818 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.73□□□□□ -1.81
USP8P40818 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
USP8P40818 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
USP8P40818 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.73□□□□□ -1.81
USP8P40818 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
USP8P40818 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
USP8P40818 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
USP8P40818 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
USP8P40818 Y_RNA.97-201ENST00000363094 102 ntBASIC3.72□□□□□ -1.81
USP8P40818 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.72□□□□□ -1.81
USP8P40818 RNU6-952P-201ENST00000391164 108 ntBASIC3.72□□□□□ -1.81
USP8P40818 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.72□□□□□ -1.81
USP8P40818 AL024474.1-201ENST00000404655 591 ntBASIC3.72□□□□□ -1.81
USP8P40818 CKS1BP5-201ENST00000434172 273 ntBASIC3.72□□□□□ -1.81
USP8P40818 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.72□□□□□ -1.81
USP8P40818 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.72□□□□□ -1.81
USP8P40818 USP9YP29-201ENST00000445112 563 ntBASIC3.72□□□□□ -1.81
USP8P40818 AC005297.2-201ENST00000450430 606 ntBASIC3.72□□□□□ -1.81
USP8P40818 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.72□□□□□ -1.81
USP8P40818 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.72□□□□□ -1.81
USP8P40818 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USP8P40818 VN1R17P-201ENST00000472048 1090 ntBASIC3.72□□□□□ -1.81
USP8P40818 AC116337.2-201ENST00000477662 156 ntBASIC3.72□□□□□ -1.81
USP8P40818 AC025518.1-201ENST00000479856 347 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms