Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL158163.1-201ENST00000603915 1649 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PHGDHO43175 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.16□□□□□ -1.74
PHGDHO43175 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PHGDHO43175 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PHGDHO43175 NOL8P1-201ENST00000508336 3529 ntBASIC4.16□□□□□ -1.74
PHGDHO43175 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PHGDHO43175 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.16□□□□□ -1.74
PHGDHO43175 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
PHGDHO43175 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.15□□□□□ -1.74
PHGDHO43175 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.15□□□□□ -1.74
PHGDHO43175 HSPE1P11-201ENST00000339579 310 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 RNU6-1097P-201ENST00000363586 107 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 Y_RNA.159-201ENST00000363674 87 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 RNA5SP167-201ENST00000365461 116 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PHGDHO43175 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PHGDHO43175 RNU6-76P-201ENST00000384060 104 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 AL136372.1-201ENST00000403060 228 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 RNU2-36P-201ENST00000410361 191 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 RAC1P3-201ENST00000416129 580 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 MTATP6P18-201ENST00000417994 673 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 AC245028.1-201ENST00000423259 256 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 USP9YP18-201ENST00000425912 695 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 FTH1P6-201ENST00000430768 320 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 MTATP6P30-201ENST00000443540 664 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 AC079781.2-201ENST00000446424 169 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PHGDHO43175 RAD23BP3-201ENST00000454157 1152 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 AC133473.1-201ENST00000455173 299 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.15□□□□□ -1.75
PHGDHO43175 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.15□□□□□ -1.75
PHGDHO43175 AF213884.1-201ENST00000488102 463 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 AC019235.1-201ENST00000503847 207 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.15□□□□□ -1.75
PHGDHO43175 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.15□□□□□ -1.75
PHGDHO43175 RNU6-390P-201ENST00000516259 103 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 RNA5SP73-201ENST00000516744 108 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 RNU6-1073P-201ENST00000517182 106 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 RNU6-840P-201ENST00000517275 65 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.15□□□□□ -1.75
PHGDHO43175 AP003072.2-201ENST00000527756 676 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.15□□□□□ -1.75
PHGDHO43175 ARL2BPP2-201ENST00000550907 489 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.15□□□□□ -1.75
PHGDHO43175 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.15□□□□□ -1.75
PHGDHO43175 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.15□□□□□ -1.75
PHGDHO43175 MIR4700-201ENST00000578311 74 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 AC067959.1-201ENST00000604334 379 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.15□□□□□ -1.75
PHGDHO43175 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.15□□□□□ -1.75
PHGDHO43175 SNHG22-203ENST00000617833 660 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 AL360181.4-201ENST00000621752 134 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 AC139792.3-201ENST00000623525 224 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
PHGDHO43175 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PHGDHO43175 Z82217.1-201ENST00000625157 8149 ntBASIC4.15□□□□□ -1.75
PHGDHO43175 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.15□□□□□ -1.75
PHGDHO43175 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PHGDHO43175 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PHGDHO43175 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.15□□□□□ -1.75
PHGDHO43175 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PHGDHO43175 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PHGDHO43175 AC018555.1-201ENST00000567548 1980 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 MFSD8-216ENST00000641147 4009 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.14□□□□□ -1.75
PHGDHO43175 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PHGDHO43175 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PHGDHO43175 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PHGDHO43175 Y_RNA.9-201ENST00000362354 101 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 RNU6-1085P-201ENST00000363576 107 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 SNORD115-47-201ENST00000391226 86 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 TXNP7-201ENST00000406296 293 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.14□□□□□ -1.75
PHGDHO43175 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.14□□□□□ -1.75
PHGDHO43175 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.14□□□□□ -1.75
PHGDHO43175 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.14□□□□□ -1.75
PHGDHO43175 DUTP6-201ENST00000425573 462 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 MTATP6P4-201ENST00000427725 675 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.14□□□□□ -1.75
PHGDHO43175 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.14□□□□□ -1.75
PHGDHO43175 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.14□□□□□ -1.75
PHGDHO43175 SNRPGP6-201ENST00000451124 220 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.14□□□□□ -1.75
PHGDHO43175 snoU13.4-201ENST00000458916 104 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 RN7SL810P-201ENST00000493031 276 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 RN7SL691P-201ENST00000494487 301 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.14□□□□□ -1.75
PHGDHO43175 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.14□□□□□ -1.75
PHGDHO43175 ARL4AP2-201ENST00000507378 601 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.14□□□□□ -1.75
PHGDHO43175 ARL2BPP6-201ENST00000512757 439 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.14□□□□□ -1.75
PHGDHO43175 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.14□□□□□ -1.75
PHGDHO43175 RNA5SP49-201ENST00000516450 115 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.14□□□□□ -1.75
PHGDHO43175 AC100870.1-201ENST00000522035 505 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.14□□□□□ -1.75
PHGDHO43175 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
PHGDHO43175 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms