Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 BX842559.1-201ENST00000419615 532 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 USP12PX-201ENST00000432383 1057 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 USP9YP15-201ENST00000442391 422 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 ARL2BPP10-201ENST00000446487 531 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 AC016696.1-201ENST00000446949 318 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 AC079168.2-201ENST00000453977 416 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 RPS20P20-201ENST00000460498 340 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 RPL23AP62-201ENST00000463396 453 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 RN7SL738P-201ENST00000470264 297 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 AL358832.1-201ENST00000497800 389 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 KCTD9P5-201ENST00000504141 1170 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 AC114797.1-201ENST00000514003 728 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 NRON-201ENST00000517270 370 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 AL355836.1-201ENST00000555951 870 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 AC068790.6-201ENST00000602558 258 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 AL391358.1-201ENST00000605342 190 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 MIR6748-201ENST00000610433 71 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 SDR42E1P2-201ENST00000614861 481 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 AC010133.1-201ENST00000615809 842 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.26□□□□□ -1.73
PPP4R4Q6NUP7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 RNU6-282P-201ENST00000365357 103 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 RNU1-63P-201ENST00000383902 164 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 PPIAP31-201ENST00000405422 495 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 RN7SKP53-201ENST00000411337 315 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 ELOCP17-201ENST00000414751 326 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 BX510359.2-201ENST00000417920 305 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 OR5BE1P-201ENST00000425977 939 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 RPL7L1P10-201ENST00000427790 463 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AC005154.2-201ENST00000438110 379 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 CBX1P1-201ENST00000440184 427 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AC073264.2-201ENST00000448886 166 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AC140076.1-201ENST00000449897 361 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 RAD23BP3-201ENST00000454157 1152 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 RPS29P22-201ENST00000472363 168 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AC010631.1-201ENST00000474150 156 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 RPL12P20-201ENST00000475538 479 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 RPS26P15-201ENST00000488067 348 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 HIGD1AP5-201ENST00000529959 259 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AC004024.1-201ENST00000549244 247 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AC107016.1-201ENST00000550463 337 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 ARL2BPP2-201ENST00000550907 489 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AC022968.1-201ENST00000567372 442 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AC010546.1-201ENST00000569391 485 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AC099489.2-201ENST00000574976 260 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 SNHG22-203ENST00000617833 660 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AC072046.2-201ENST00000618366 268 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 OR5BE1P-202ENST00000641168 1176 ntBASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PPP4R4Q6NUP7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms