Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.72□□□□□ -1.65
KRT40Q6A162 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.72□□□□□ -1.65
KRT40Q6A162 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.72□□□□□ -1.65
KRT40Q6A162 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.72□□□□□ -1.65
KRT40Q6A162 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.72□□□□□ -1.65
KRT40Q6A162 ELOCP23-201ENST00000452014 332 ntBASIC4.72□□□□□ -1.65
KRT40Q6A162 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.72□□□□□ -1.65
KRT40Q6A162 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.72□□□□□ -1.65
KRT40Q6A162 TRBV26-201ENST00000456572 344 ntBASIC4.72□□□□□ -1.65
KRT40Q6A162 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.72□□□□□ -1.65
KRT40Q6A162 AC005726.1-201ENST00000494679 427 ntBASIC4.72□□□□□ -1.65
KRT40Q6A162 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.72□□□□□ -1.65
KRT40Q6A162 AC114786.4-201ENST00000508771 728 ntBASIC4.72□□□□□ -1.65
KRT40Q6A162 RNU6-1281P-201ENST00000516223 105 ntBASIC4.72□□□□□ -1.65
KRT40Q6A162 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.72□□□□□ -1.65
KRT40Q6A162 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.72□□□□□ -1.65
KRT40Q6A162 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.72□□□□□ -1.65
KRT40Q6A162 MIR3118-1-201ENST00000581787 76 ntBASIC4.72□□□□□ -1.65
KRT40Q6A162 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.72□□□□□ -1.65
KRT40Q6A162 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.72□□□□□ -1.65
KRT40Q6A162 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.72□□□□□ -1.65
KRT40Q6A162 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.72□□□□□ -1.65
KRT40Q6A162 AP006248.2-201ENST00000623309 592 ntBASIC4.72□□□□□ -1.65
KRT40Q6A162 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
KRT40Q6A162 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRT40Q6A162 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.72□□□□□ -1.65
KRT40Q6A162 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.72□□□□□ -1.65
KRT40Q6A162 AC010329.2-201ENST00000595195 2737 ntBASIC4.72□□□□□ -1.65
KRT40Q6A162 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRT40Q6A162 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
KRT40Q6A162 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
KRT40Q6A162 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.65
KRT40Q6A162 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.71□□□□□ -1.65
KRT40Q6A162 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.71□□□□□ -1.65
KRT40Q6A162 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KRT40Q6A162 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 AC022893.2-201ENST00000564832 3296 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 MTND4P23-201ENST00000447723 1363 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 RNU6-853P-201ENST00000364306 107 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 Y_RNA.381-201ENST00000365666 102 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
KRT40Q6A162 RNU1-39P-201ENST00000383897 165 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 AC068050.1-201ENST00000394891 380 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 RNA5SP306-201ENST00000411087 107 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.71□□□□□ -1.66
KRT40Q6A162 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.71□□□□□ -1.66
KRT40Q6A162 AC096632.1-201ENST00000427395 310 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.71□□□□□ -1.66
KRT40Q6A162 RPL23AP74-201ENST00000437246 471 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 RPL23AP20-201ENST00000447965 421 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 AL500522.2-201ENST00000448562 343 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.71□□□□□ -1.66
KRT40Q6A162 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.71□□□□□ -1.66
KRT40Q6A162 FDX1P2-201ENST00000450769 375 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 AC104073.1-201ENST00000451988 151 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.71□□□□□ -1.66
KRT40Q6A162 AP001025.2-201ENST00000490908 477 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.71□□□□□ -1.66
KRT40Q6A162 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.71□□□□□ -1.66
KRT40Q6A162 CBX3P5-201ENST00000552017 521 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 LSM6P2-201ENST00000552208 177 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 SUB1P2-201ENST00000556401 297 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.71□□□□□ -1.66
KRT40Q6A162 SULT1C2P2-201ENST00000562517 294 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 MIR5684-201ENST00000585074 65 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 AL353997.4-201ENST00000586196 166 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 AC008638.3-201ENST00000603341 463 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 AC012507.3-201ENST00000603556 477 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 AC104662.1-201ENST00000604448 511 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 BX664608.1-201ENST00000610519 487 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 LINC00901.1-201ENST00000617252 152 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 AC068722.2-201ENST00000618734 544 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 AC000123.2-201ENST00000623124 461 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 AL773545.4-201ENST00000637262 310 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 AL513478.4-201ENST00000641636 310 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KRT40Q6A162 MAPK10-253ENST00000641010 4072 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
KRT40Q6A162 RPS4XP5-202ENST00000449995 1334 ntBASIC4.71□□□□□ -1.66
KRT40Q6A162 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KRT40Q6A162 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.7□□□□□ -1.66
KRT40Q6A162 LINC01109-201ENST00000603837 3081 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
KRT40Q6A162 AC130650.2-201ENST00000618736 2403 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 SNORA9-201ENST00000384215 133 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 RNU11-4P-201ENST00000391149 133 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 AL024474.1-201ENST00000404655 591 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 BTBD10P2-201ENST00000404779 676 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 AC127391.1-201ENST00000411737 98 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 NUP35P2-201ENST00000416748 943 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 ZNF90P2-204ENST00000419323 1075 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.7□□□□□ -1.66
KRT40Q6A162 AC009965.2-201ENST00000425328 970 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 AL031736.2-201ENST00000426573 787 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.7□□□□□ -1.66
KRT40Q6A162 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.7□□□□□ -1.66
KRT40Q6A162 RPS26P56-201ENST00000444468 240 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.7□□□□□ -1.66
KRT40Q6A162 AL354710.1-201ENST00000453641 246 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 PMCHL2-203ENST00000457791 237 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms