Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 AC106785.1-201ENST00000565935 262 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 MIR4277-201ENST00000578298 84 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 MIR548AC-201ENST00000585049 88 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 AC012669.1-201ENST00000603209 283 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 AL713866.2-201ENST00000603579 219 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 MIR3976-201ENST00000606807 139 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 AC006023.2-201ENST00000609916 167 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 ZNF285B-201ENST00000561698 1767 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 SNX18P3-202ENST00000565670 1750 ntBASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PRPF38BQ5VTL8 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 SNURFL-201ENST00000309296 343 ntBASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 RNA5SP211-201ENST00000365516 117 ntBASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 MIR578-201ENST00000384828 96 ntBASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 MIR548H3-201ENST00000408771 118 ntBASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 RPS4XP20-201ENST00000505751 772 ntBASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 AC113155.1-201ENST00000511141 769 ntBASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 AC074255.1-201ENST00000511259 501 ntBASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 RNU6-1095P-201ENST00000516148 108 ntBASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 RNU6-914P-201ENST00000516749 109 ntBASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 AC087369.1-201ENST00000520775 996 ntBASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 AC022790.1-201ENST00000522872 204 ntBASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 AMZ2P1-203ENST00000565833 850 ntBASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 AC090607.5-201ENST00000615692 224 ntBASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 AC091903.1-201ENST00000624322 454 ntBASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PRPF38BQ5VTL8 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
PRPF38BQ5VTL8 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PRPF38BQ5VTL8 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
PRPF38BQ5VTL8 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 AP000432.2-201ENST00000624164 2048 ntBASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 PHKBP1-201ENST00000450951 1951 ntBASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 AC073365.1-203ENST00000641055 1992 ntBASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 RNU6-1155P-201ENST00000363554 107 ntBASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 Y_RNA.180-201ENST00000363867 113 ntBASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 AL513475.1-201ENST00000406602 315 ntBASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 AC007098.1-201ENST00000420122 367 ntBASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 LINC01399-202ENST00000458450 244 ntBASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 CREM-226ENST00000469949 721 ntTSL 3 BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 AC110792.1-201ENST00000491826 472 ntBASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 RPS17P5-201ENST00000498293 408 ntBASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 SNORA81.3-201ENST00000517283 198 ntBASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 AC109583.2-201ENST00000617367 129 ntBASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 AL731556.1-201ENST00000394628 3711 ntBASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PRPF38BQ5VTL8 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
PRPF38BQ5VTL8 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC6.07□□□□□ -1.44
PRPF38BQ5VTL8 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms