Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC233702.1-201ENST00000482905 502 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 AC087190.1-201ENST00000484462 480 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 AC093591.1-201ENST00000491435 481 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 RPL21P16-201ENST00000495531 483 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
COL8A2P25067 AC096571.1-202ENST00000506634 735 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 TPT1P8-201ENST00000510120 555 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
COL8A2P25067 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.24□□□□□ -2.05
COL8A2P25067 RNU6-56P-201ENST00000516986 93 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 LRRC6P1-201ENST00000532188 885 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.24□□□□□ -2.05
COL8A2P25067 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.24□□□□□ -2.05
COL8A2P25067 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.24□□□□□ -2.05
COL8A2P25067 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.24□□□□□ -2.05
COL8A2P25067 BPTFP1-201ENST00000579209 492 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 MIR3605-201ENST00000583214 100 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.24□□□□□ -2.05
COL8A2P25067 BNIP3P40-201ENST00000596017 556 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 AC026790.2-201ENST00000606282 430 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 AP000240.1-201ENST00000609910 452 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 AC004696.1-201ENST00000614345 607 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 AC092608.2-201ENST00000624427 218 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.24□□□□□ -2.05
COL8A2P25067 IGHVIII-44-202ENST00000636235 289 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 SGO1P1-201ENST00000603525 1447 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 SAGE4P-201ENST00000442271 3381 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 TAB3P1-202ENST00000452645 1634 ntBASIC2.24□□□□□ -2.05
COL8A2P25067 AC111188.2-201ENST00000529697 1387 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 AL049780.3-201ENST00000624612 1583 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL8A2P25067 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
COL8A2P25067 AL672167.1-206ENST00000356293 943 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 DEFB109C-201ENST00000382575 264 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 DEFB109B-201ENST00000382656 264 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 MIR16-1-201ENST00000385271 89 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 Y_RNA.578-201ENST00000390903 88 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 RNU6-837P-201ENST00000391056 108 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 RNA5SP80-201ENST00000410475 111 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.23□□□□□ -2.05
COL8A2P25067 RPS7P9-201ENST00000414704 586 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.23□□□□□ -2.05
COL8A2P25067 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.23□□□□□ -2.05
COL8A2P25067 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.23□□□□□ -2.05
COL8A2P25067 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.23□□□□□ -2.05
COL8A2P25067 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.23□□□□□ -2.05
COL8A2P25067 AC109583.1-201ENST00000432156 268 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.23□□□□□ -2.05
COL8A2P25067 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.23□□□□□ -2.05
COL8A2P25067 RPL39P40-201ENST00000445481 146 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.23□□□□□ -2.05
COL8A2P25067 AC133134.1-201ENST00000466800 359 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 AC104164.3-201ENST00000467363 1258 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 HMGB1P25-201ENST00000468402 607 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.23□□□□□ -2.05
COL8A2P25067 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.23□□□□□ -2.05
COL8A2P25067 HMGB1P22-201ENST00000505315 124 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 KLHL2P1-201ENST00000508691 521 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 AC118282.2-201ENST00000508739 374 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 SNORA19.3-201ENST00000516165 130 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 SNORA9.3-201ENST00000516383 129 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 RNA5SP148-201ENST00000516527 94 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 snoZ278.1-201ENST00000517059 112 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 SNORA31.20-201ENST00000517111 133 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 AC091163.3-201ENST00000518269 1144 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 AP000857.1-201ENST00000532151 543 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.23□□□□□ -2.05
COL8A2P25067 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.23□□□□□ -2.05
COL8A2P25067 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.23□□□□□ -2.05
COL8A2P25067 SETP2-201ENST00000553886 926 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.23□□□□□ -2.05
COL8A2P25067 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.23□□□□□ -2.05
COL8A2P25067 AC245884.10-201ENST00000597355 337 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 AC091057.3-201ENST00000602684 733 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 RPL23AP92-201ENST00000603609 255 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 RPAP2P1-201ENST00000603626 1168 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 AC112220.2-201ENST00000605513 533 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 VN1R7P-201ENST00000619242 903 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.23□□□□□ -2.05
COL8A2P25067 AC109454.4-201ENST00000623411 649 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.23□□□□□ -2.05
COL8A2P25067 AC010733.2-201ENST00000589496 5702 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
COL8A2P25067 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL8A2P25067 AP000526.1-201ENST00000603308 1388 ntBASIC2.23□□□□□ -2.05
COL8A2P25067 AC109315.1-201ENST00000584143 1347 ntBASIC2.22□□□□□ -2.05
COL8A2P25067 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL8A2P25067 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
COL8A2P25067 RNU4-82P-201ENST00000362443 140 ntBASIC2.22□□□□□ -2.05
COL8A2P25067 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.22□□□□□ -2.05
COL8A2P25067 OR1L1-202ENST00000373686 1083 ntBASIC2.22□□□□□ -2.05
COL8A2P25067 RNU6-441P-201ENST00000384545 106 ntBASIC2.22□□□□□ -2.05
COL8A2P25067 SFR1P1-201ENST00000403720 688 ntBASIC2.22□□□□□ -2.05
COL8A2P25067 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.22□□□□□ -2.05
COL8A2P25067 RNA5SP56-201ENST00000410277 118 ntBASIC2.22□□□□□ -2.05
COL8A2P25067 OR51A3P-201ENST00000413596 924 ntBASIC2.22□□□□□ -2.05
COL8A2P25067 RPS3AP9-201ENST00000417027 792 ntBASIC2.22□□□□□ -2.05
COL8A2P25067 MTND4P3-201ENST00000417829 541 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms