Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.31□□□□□ -1.72
ZBED1O96006 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.31□□□□□ -1.72
ZBED1O96006 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.31□□□□□ -1.72
ZBED1O96006 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 AC010975.2-201ENST00000427781 588 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.31□□□□□ -1.72
ZBED1O96006 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.31□□□□□ -1.72
ZBED1O96006 RPS6P12-201ENST00000432491 726 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 AC024082.2-201ENST00000434771 238 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 OR4C10P-201ENST00000434991 931 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.31□□□□□ -1.72
ZBED1O96006 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.31□□□□□ -1.72
ZBED1O96006 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.31□□□□□ -1.72
ZBED1O96006 AC110792.1-201ENST00000491826 472 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 RPL23AP55-201ENST00000498163 452 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.31□□□□□ -1.72
ZBED1O96006 AC025554.1-201ENST00000505641 188 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 Vault.3-201ENST00000516676 95 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 MTCO2P4-201ENST00000517968 247 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 IGKV2D-23-201ENST00000518179 286 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 AC022880.1-201ENST00000534017 973 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.31□□□□□ -1.72
ZBED1O96006 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.31□□□□□ -1.72
ZBED1O96006 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.31□□□□□ -1.72
ZBED1O96006 AC007224.1-201ENST00000564410 144 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.31□□□□□ -1.72
ZBED1O96006 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.31□□□□□ -1.72
ZBED1O96006 RPL23AP87-202ENST00000573039 466 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 ZNF415P1-201ENST00000582279 1166 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.31□□□□□ -1.72
ZBED1O96006 VN1R79P-201ENST00000593540 513 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 AC012443.1-201ENST00000605605 231 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 RNU4-89P-201ENST00000607443 133 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 AC004067.1-201ENST00000608733 700 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.31□□□□□ -1.72
ZBED1O96006 ZYXP1-201ENST00000617638 118 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 AC006338.1-201ENST00000618453 749 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 AL732618.1-201ENST00000623251 301 ntBASIC4.31□□□□□ -1.72
ZBED1O96006 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.31□□□□□ -1.72
ZBED1O96006 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
ZBED1O96006 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ZBED1O96006 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZBED1O96006 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
ZBED1O96006 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.31□□□□□ -1.72
ZBED1O96006 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZBED1O96006 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZBED1O96006 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZBED1O96006 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.3□□□□□ -1.72
ZBED1O96006 SNORA60-201ENST00000362396 134 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 RNU5E-1-201ENST00000362477 120 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 RNU5E-8P-201ENST00000363502 116 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ZBED1O96006 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ZBED1O96006 HSPE1P12-201ENST00000412576 301 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.3□□□□□ -1.72
ZBED1O96006 ELOCP4-201ENST00000420090 333 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 AC090774.1-201ENST00000435925 246 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 RPL21P89-201ENST00000444021 467 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 AL136380.1-201ENST00000447970 162 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 MTCO3P20-201ENST00000454926 688 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 MTCO2P29-201ENST00000465212 189 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 RPS3AP17-201ENST00000472594 777 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 RPL29P14-201ENST00000495837 428 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.3□□□□□ -1.72
ZBED1O96006 MIR2116-201ENST00000517221 80 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 RNU6-840P-201ENST00000517275 65 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 AC011979.2-201ENST00000527568 352 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 TOMM20P2-201ENST00000540082 421 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.3□□□□□ -1.72
ZBED1O96006 CCNG2P1-201ENST00000549521 1000 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.3□□□□□ -1.72
ZBED1O96006 AC009063.1-201ENST00000563342 702 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.3□□□□□ -1.72
ZBED1O96006 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.3□□□□□ -1.72
ZBED1O96006 AL391840.1-201ENST00000571144 367 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 MIR5684-201ENST00000585074 65 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 AP001330.4-201ENST00000604350 154 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 AL161729.4-201ENST00000604650 476 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.3□□□□□ -1.72
ZBED1O96006 AC087241.4-201ENST00000612441 480 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
ZBED1O96006 AC092326.2-201ENST00000624772 1561 ntBASIC4.3□□□□□ -1.72
ZBED1O96006 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ZBED1O96006 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
ZBED1O96006 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ZBED1O96006 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZBED1O96006 AC138915.3-201ENST00000562908 1389 ntBASIC4.29□□□□□ -1.72
ZBED1O96006 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZBED1O96006 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZBED1O96006 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.29□□□□□ -1.72
ZBED1O96006 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ZBED1O96006 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
ZBED1O96006 SPRR2C-201ENST00000290702 219 ntBASIC4.29□□□□□ -1.72
ZBED1O96006 XIAPP3-201ENST00000312918 795 ntBASIC4.29□□□□□ -1.72
ZBED1O96006 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZBED1O96006 RNU6-259P-201ENST00000383999 107 ntBASIC4.29□□□□□ -1.72
ZBED1O96006 MIR3074-201ENST00000384885 81 ntBASIC4.29□□□□□ -1.72
ZBED1O96006 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms