Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.01□□□□□ -1.93
NPHP4O75161 AP001148.1-201ENST00000624124 2359 ntBASIC3.01□□□□□ -1.93
NPHP4O75161 MIR518E-201ENST00000385252 88 ntBASIC3.01□□□□□ -1.93
NPHP4O75161 HMGB1P10-201ENST00000395823 563 ntBASIC3.01□□□□□ -1.93
NPHP4O75161 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.01□□□□□ -1.93
NPHP4O75161 AC241520.1-201ENST00000422654 1099 ntBASIC3.01□□□□□ -1.93
NPHP4O75161 CKS1BP5-201ENST00000434172 273 ntBASIC3.01□□□□□ -1.93
NPHP4O75161 AC009237.8-201ENST00000445492 379 ntBASIC3.01□□□□□ -1.93
NPHP4O75161 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.01□□□□□ -1.93
NPHP4O75161 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.01□□□□□ -1.93
NPHP4O75161 AP004242.1-201ENST00000533701 349 ntBASIC3.01□□□□□ -1.93
NPHP4O75161 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.01□□□□□ -1.93
NPHP4O75161 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.01□□□□□ -1.93
NPHP4O75161 AC110588.1-201ENST00000559699 137 ntBASIC3.01□□□□□ -1.93
NPHP4O75161 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.01□□□□□ -1.93
NPHP4O75161 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
NPHP4O75161 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.01□□□□□ -1.93
NPHP4O75161 YWHAQP7-201ENST00000603536 658 ntBASIC3.01□□□□□ -1.93
NPHP4O75161 AP000787.2-201ENST00000604432 568 ntBASIC3.01□□□□□ -1.93
NPHP4O75161 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.01□□□□□ -1.93
NPHP4O75161 AC090617.9-201ENST00000623751 147 ntBASIC3.01□□□□□ -1.93
NPHP4O75161 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
NPHP4O75161 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
NPHP4O75161 AC009487.4-201ENST00000624969 3585 ntBASIC3□□□□□ -1.93
NPHP4O75161 ZNF33CP-201ENST00000432492 2030 ntBASIC3□□□□□ -1.93
NPHP4O75161 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
NPHP4O75161 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3□□□□□ -1.93
NPHP4O75161 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3□□□□□ -1.93
NPHP4O75161 ANKRD62P1-201ENST00000434304 1623 ntBASIC3□□□□□ -1.93
NPHP4O75161 AC016716.1-201ENST00000265882 708 ntBASIC3□□□□□ -1.93
NPHP4O75161 METTL21EP-201ENST00000298105 713 ntBASIC3□□□□□ -1.93
NPHP4O75161 SNORD115-48-201ENST00000364764 76 ntBASIC3□□□□□ -1.93
NPHP4O75161 RNU6-1005P-201ENST00000384519 107 ntBASIC3□□□□□ -1.93
NPHP4O75161 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3□□□□□ -1.93
NPHP4O75161 NUP35P2-201ENST00000416748 943 ntBASIC3□□□□□ -1.93
NPHP4O75161 OR51AB1P-201ENST00000429046 620 ntBASIC3□□□□□ -1.93
NPHP4O75161 ZNF965P-201ENST00000432501 817 ntBASIC3□□□□□ -1.93
NPHP4O75161 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3□□□□□ -1.93
NPHP4O75161 YWHAZP8-201ENST00000436935 731 ntBASIC3□□□□□ -1.93
NPHP4O75161 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3□□□□□ -1.93
NPHP4O75161 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3□□□□□ -1.93
NPHP4O75161 AC104689.1-201ENST00000473356 768 ntBASIC3□□□□□ -1.93
NPHP4O75161 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3□□□□□ -1.93
NPHP4O75161 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3□□□□□ -1.93
NPHP4O75161 AC005840.1-201ENST00000498412 377 ntBASIC3□□□□□ -1.93
NPHP4O75161 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3□□□□□ -1.93
NPHP4O75161 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3□□□□□ -1.93
NPHP4O75161 C1DP5-201ENST00000525775 383 ntBASIC3□□□□□ -1.93
NPHP4O75161 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3□□□□□ -1.93
NPHP4O75161 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3□□□□□ -1.93
NPHP4O75161 AL160394.1-201ENST00000624765 724 ntBASIC3□□□□□ -1.93
NPHP4O75161 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3□□□□□ -1.93
NPHP4O75161 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NPHP4O75161 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NPHP4O75161 AC007256.1-201ENST00000392253 2765 ntBASIC2.99□□□□□ -1.93
NPHP4O75161 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NPHP4O75161 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NPHP4O75161 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.99□□□□□ -1.93
NPHP4O75161 TAF9BP2-201ENST00000400856 499 ntBASIC2.99□□□□□ -1.93
NPHP4O75161 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.99□□□□□ -1.93
NPHP4O75161 RNU2-17P-201ENST00000410290 190 ntBASIC2.99□□□□□ -1.93
NPHP4O75161 RNA5SP270-201ENST00000411361 118 ntBASIC2.99□□□□□ -1.93
NPHP4O75161 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.99□□□□□ -1.93
NPHP4O75161 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.99□□□□□ -1.93
NPHP4O75161 RPL23AP33-201ENST00000442301 452 ntBASIC2.99□□□□□ -1.93
NPHP4O75161 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.99□□□□□ -1.93
NPHP4O75161 AP000705.1-201ENST00000454567 350 ntBASIC2.99□□□□□ -1.93
NPHP4O75161 PTGES3P5-201ENST00000455109 434 ntBASIC2.99□□□□□ -1.93
NPHP4O75161 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.99□□□□□ -1.93
NPHP4O75161 MTND2P6-201ENST00000455337 1030 ntBASIC2.99□□□□□ -1.93
NPHP4O75161 RNU4-60P-201ENST00000517239 135 ntBASIC2.99□□□□□ -1.93
NPHP4O75161 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.99□□□□□ -1.93
NPHP4O75161 HMGB1P1-201ENST00000522557 636 ntBASIC2.99□□□□□ -1.93
NPHP4O75161 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.99□□□□□ -1.93
NPHP4O75161 MTATP6P25-201ENST00000574491 261 ntBASIC2.99□□□□□ -1.93
NPHP4O75161 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.99□□□□□ -1.93
NPHP4O75161 KATNBL1P1-201ENST00000605192 748 ntBASIC2.99□□□□□ -1.93
NPHP4O75161 AC048347.1-201ENST00000624621 427 ntBASIC2.99□□□□□ -1.93
NPHP4O75161 CU459211.1-201ENST00000635667 749 ntBASIC2.99□□□□□ -1.93
NPHP4O75161 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.99□□□□□ -1.93
NPHP4O75161 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NPHP4O75161 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
NPHP4O75161 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NPHP4O75161 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.98□□□□□ -1.93
NPHP4O75161 FAM35CP-201ENST00000554755 2470 ntBASIC2.98□□□□□ -1.93
NPHP4O75161 RNU6-252P-201ENST00000363232 107 ntBASIC2.98□□□□□ -1.93
NPHP4O75161 SNORA25.9-201ENST00000365087 128 ntBASIC2.98□□□□□ -1.93
NPHP4O75161 OR5H15-201ENST00000383696 930 ntBASIC2.98□□□□□ -1.93
NPHP4O75161 RNU6-356P-201ENST00000384140 107 ntBASIC2.98□□□□□ -1.93
NPHP4O75161 PRRC2CP1-201ENST00000404428 159 ntBASIC2.98□□□□□ -1.93
NPHP4O75161 BTF3P4-201ENST00000418852 495 ntBASIC2.98□□□□□ -1.93
NPHP4O75161 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.98□□□□□ -1.93
NPHP4O75161 MTCO1P43-201ENST00000431831 488 ntBASIC2.98□□□□□ -1.93
NPHP4O75161 AL691517.1-201ENST00000440833 1235 ntBASIC2.98□□□□□ -1.93
NPHP4O75161 AL591719.1-201ENST00000444669 744 ntBASIC2.98□□□□□ -1.93
NPHP4O75161 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.98□□□□□ -1.93
NPHP4O75161 SNORD13-201ENST00000459299 104 ntBASIC2.98□□□□□ -1.93
NPHP4O75161 AC089999.1-201ENST00000460336 374 ntBASIC2.98□□□□□ -1.93
NPHP4O75161 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.98□□□□□ -1.93
NPHP4O75161 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms