Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.21□□□□□ -1.74
PROM1O43490 YWHAEP7-203ENST00000622054 312 ntBASIC4.21□□□□□ -1.74
PROM1O43490 C2orf27A-204ENST00000623058 969 ntBASIC4.21□□□□□ -1.74
PROM1O43490 AC079597.1-201ENST00000624306 508 ntBASIC4.21□□□□□ -1.74
PROM1O43490 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PROM1O43490 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.21□□□□□ -1.74
PROM1O43490 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PROM1O43490 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PROM1O43490 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
PROM1O43490 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.21□□□□□ -1.74
PROM1O43490 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
PROM1O43490 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PROM1O43490 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PROM1O43490 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PROM1O43490 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.2□□□□□ -1.74
PROM1O43490 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PROM1O43490 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PROM1O43490 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
PROM1O43490 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.2□□□□□ -1.74
PROM1O43490 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PROM1O43490 AC105074.1-201ENST00000623380 3095 ntBASIC4.2□□□□□ -1.74
PROM1O43490 RNA5SP447-201ENST00000363749 119 ntBASIC4.2□□□□□ -1.74
PROM1O43490 Y_RNA.356-201ENST00000365475 113 ntBASIC4.2□□□□□ -1.74
PROM1O43490 RNU1-39P-201ENST00000383897 165 ntBASIC4.2□□□□□ -1.74
PROM1O43490 RNU1-44P-201ENST00000384453 163 ntBASIC4.2□□□□□ -1.74
PROM1O43490 MIR3065-201ENST00000390137 79 ntBASIC4.2□□□□□ -1.74
PROM1O43490 RNU6-908P-201ENST00000410160 94 ntBASIC4.2□□□□□ -1.74
PROM1O43490 RNU2-9P-201ENST00000410194 145 ntBASIC4.2□□□□□ -1.74
PROM1O43490 ELOCP19-201ENST00000411919 318 ntBASIC4.2□□□□□ -1.74
PROM1O43490 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.2□□□□□ -1.74
PROM1O43490 SNRPEP10-201ENST00000420249 274 ntBASIC4.2□□□□□ -1.74
PROM1O43490 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.2□□□□□ -1.74
PROM1O43490 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.2□□□□□ -1.74
PROM1O43490 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PROM1O43490 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.2□□□□□ -1.74
PROM1O43490 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.2□□□□□ -1.74
PROM1O43490 RPL23AP33-201ENST00000442301 452 ntBASIC4.2□□□□□ -1.74
PROM1O43490 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.2□□□□□ -1.74
PROM1O43490 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.2□□□□□ -1.74
PROM1O43490 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.2□□□□□ -1.74
PROM1O43490 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.2□□□□□ -1.74
PROM1O43490 SNRPGP5-201ENST00000456003 220 ntBASIC4.2□□□□□ -1.74
PROM1O43490 RPS27AP17-201ENST00000463344 455 ntBASIC4.2□□□□□ -1.74
PROM1O43490 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.2□□□□□ -1.74
PROM1O43490 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.2□□□□□ -1.74
PROM1O43490 AC026402.1-201ENST00000513642 170 ntBASIC4.2□□□□□ -1.74
PROM1O43490 RNU6-1220P-201ENST00000517126 108 ntBASIC4.2□□□□□ -1.74
PROM1O43490 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PROM1O43490 AC092470.1-201ENST00000546187 132 ntBASIC4.2□□□□□ -1.74
PROM1O43490 AC060771.1-201ENST00000582031 164 ntBASIC4.2□□□□□ -1.74
PROM1O43490 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.2□□□□□ -1.74
PROM1O43490 AC068790.3-201ENST00000602988 553 ntBASIC4.2□□□□□ -1.74
PROM1O43490 AL139395.1-201ENST00000603662 160 ntBASIC4.2□□□□□ -1.74
PROM1O43490 AL121757.2-201ENST00000611223 313 ntBASIC4.2□□□□□ -1.74
PROM1O43490 AC004825.2-201ENST00000616634 455 ntBASIC4.2□□□□□ -1.74
PROM1O43490 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PROM1O43490 AC009161.2-201ENST00000624626 138 ntBASIC4.2□□□□□ -1.74
PROM1O43490 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PROM1O43490 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PROM1O43490 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.2□□□□□ -1.74
PROM1O43490 AL122126.1-201ENST00000546905 1318 ntBASIC4.2□□□□□ -1.74
PROM1O43490 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PROM1O43490 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PROM1O43490 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PROM1O43490 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
PROM1O43490 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PROM1O43490 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.19□□□□□ -1.74
PROM1O43490 MTND5P33-201ENST00000571250 1450 ntBASIC4.19□□□□□ -1.74
PROM1O43490 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PROM1O43490 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.19□□□□□ -1.74
PROM1O43490 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PROM1O43490 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PROM1O43490 RNU1-130P-201ENST00000363930 160 ntBASIC4.19□□□□□ -1.74
PROM1O43490 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.19□□□□□ -1.74
PROM1O43490 MIR129-1-201ENST00000384972 72 ntBASIC4.19□□□□□ -1.74
PROM1O43490 RNU4-25P-201ENST00000410569 230 ntBASIC4.19□□□□□ -1.74
PROM1O43490 RN7SKP167-201ENST00000411047 285 ntBASIC4.19□□□□□ -1.74
PROM1O43490 SNORA74C-2-201ENST00000411179 201 ntBASIC4.19□□□□□ -1.74
PROM1O43490 OR9R1P-201ENST00000412200 877 ntBASIC4.19□□□□□ -1.74
PROM1O43490 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.19□□□□□ -1.74
PROM1O43490 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.19□□□□□ -1.74
PROM1O43490 AL132765.1-201ENST00000434165 553 ntBASIC4.19□□□□□ -1.74
PROM1O43490 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.19□□□□□ -1.74
PROM1O43490 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.19□□□□□ -1.74
PROM1O43490 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.19□□□□□ -1.74
PROM1O43490 AP001992.1-205ENST00000462248 379 ntBASIC4.19□□□□□ -1.74
PROM1O43490 RPL23AP41-201ENST00000484754 458 ntBASIC4.19□□□□□ -1.74
PROM1O43490 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.19□□□□□ -1.74
PROM1O43490 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.19□□□□□ -1.74
PROM1O43490 AC093840.1-201ENST00000511599 336 ntBASIC4.19□□□□□ -1.74
PROM1O43490 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.19□□□□□ -1.74
PROM1O43490 AC093853.1-201ENST00000515689 483 ntBASIC4.19□□□□□ -1.74
PROM1O43490 AC008694.2-201ENST00000517591 306 ntBASIC4.19□□□□□ -1.74
PROM1O43490 AC022616.3-201ENST00000523940 148 ntBASIC4.19□□□□□ -1.74
PROM1O43490 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.19□□□□□ -1.74
PROM1O43490 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.19□□□□□ -1.74
PROM1O43490 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.19□□□□□ -1.74
PROM1O43490 AL352979.3-201ENST00000553515 247 ntBASIC4.19□□□□□ -1.74
PROM1O43490 MIR3160-1-201ENST00000577972 85 ntBASIC4.19□□□□□ -1.74
PROM1O43490 AC025449.1-201ENST00000603896 529 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms