Protein–RNA interactions for Protein: C9JLJ4

USP17L13, Ubiquitin carboxyl-terminal hydrolase 17-like protein 13, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L13C9JLJ4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP17L13C9JLJ4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.85□□□□□ -1.47
USP17L13C9JLJ4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP17L13C9JLJ4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
USP17L13C9JLJ4 STX3-208ENST00000641815 3236 ntBASIC5.85□□□□□ -1.47
USP17L13C9JLJ4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP17L13C9JLJ4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP17L13C9JLJ4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
USP17L13C9JLJ4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
USP17L13C9JLJ4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 MAPK10-263ENST00000641052 4307 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 RNU6-1155P-201ENST00000363554 107 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 Y_RNA.158-201ENST00000363651 101 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 SNORA23-201ENST00000365128 182 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 SNORA2.3-201ENST00000383920 135 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 Y_RNA.401-201ENST00000383965 117 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 Y_RNA.605-201ENST00000410577 105 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 E2F6P2-201ENST00000420708 748 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 RPL21P109-201ENST00000422213 475 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 NEFMP1-201ENST00000443423 1006 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 AC073264.2-201ENST00000448886 166 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 AP001086.1-201ENST00000494882 321 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 AC097473.1-201ENST00000508142 408 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 RNU2-69P-201ENST00000516061 100 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 RNU6-1095P-201ENST00000516148 108 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 RNU6-1213P-201ENST00000517075 94 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 RNU1-54P-201ENST00000517181 120 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 AC027369.5-201ENST00000533838 755 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 AP006289.1-201ENST00000538089 277 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 MTCO3P23-201ENST00000561363 289 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 MIR378J-201ENST00000611988 109 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 MIR7703-201ENST00000620784 77 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 PLCE1P1-201ENST00000622094 305 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 AC022418.1-201ENST00000624118 445 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 OR9K1P-202ENST00000641111 3217 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 AC140134.1-201ENST00000511830 3544 ntBASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
USP17L13C9JLJ4 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
USP17L13C9JLJ4 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.84□□□□□ -1.48
USP17L13C9JLJ4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 GVINP1-202ENST00000531871 7271 ntBASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 RNU6-715P-201ENST00000365204 103 ntBASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 MIR135A2-201ENST00000384854 100 ntBASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 SNORA48.4-201ENST00000391089 134 ntBASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 AL583834.1-201ENST00000406943 343 ntBASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 RNU4-78P-201ENST00000410940 126 ntBASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 MCFD2P1-201ENST00000417812 300 ntBASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 AL138785.1-201ENST00000425821 331 ntBASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 AC009238.2-201ENST00000431026 355 ntBASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 AC004866.2-201ENST00000438285 481 ntBASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 RN7SL481P-201ENST00000477764 299 ntBASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 RNU6-352P-201ENST00000516908 107 ntBASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 Y_RNA.708-201ENST00000516950 96 ntBASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 AC105031.1-201ENST00000518550 476 ntBASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 RAB9BP1-201ENST00000519581 626 ntBASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 AP003122.3-201ENST00000526316 255 ntBASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 MIR4680-201ENST00000580906 66 ntBASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 AC087588.2-201ENST00000617667 426 ntBASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L13C9JLJ4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms