Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 AC104454.1-201ENST00000421341 1401 ntBASIC3.87□□□□□ -1.79
BLOC1S4Q9NUP1 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 RNU6-223P-201ENST00000362830 107 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 RNU6-853P-201ENST00000364306 107 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 U3.42-201ENST00000408746 214 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 RHEBP3-201ENST00000411920 351 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 AC010099.3-201ENST00000423896 409 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 BX119904.4-201ENST00000424402 301 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 AP000907.1-201ENST00000428428 510 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 OR4K11P-201ENST00000431829 904 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 AP000542.1-201ENST00000448473 371 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 AC104978.1-201ENST00000449387 391 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 RNA5SP310-201ENST00000459084 116 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 AL049714.1-201ENST00000466686 347 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 HMGB1P36-201ENST00000487709 576 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 MIR2276-201ENST00000516886 89 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 OR5B10P-201ENST00000532869 642 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 AC034268.2-201ENST00000571784 482 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 AC004067.1-201ENST00000608733 700 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 AP000254.1-201ENST00000609934 520 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 RPS4XP5-202ENST00000449995 1334 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 AC009902.3-201ENST00000606235 2172 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 AC058791.1-201ENST00000608412 3198 ntBASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
BLOC1S4Q9NUP1 DDX10P1-201ENST00000448545 1933 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AC032011.1-201ENST00000611703 1549 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 RNU4-35P-201ENST00000362588 141 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 RNU6-114P-201ENST00000384704 105 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 RNU6-516P-201ENST00000411381 104 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AC098592.1-201ENST00000419352 333 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AL159169.1-201ENST00000421119 127 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 PPP1R11P2-201ENST00000423543 382 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AC073063.1-201ENST00000434352 607 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AL008629.1-201ENST00000438615 184 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 LSM1P1-201ENST00000438629 273 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 TXNP1-201ENST00000441872 371 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 RNU7-170P-201ENST00000459303 61 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 HSPE1P6-201ENST00000479457 291 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 SNORA67.7-201ENST00000516664 135 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AC092851.1-201ENST00000535964 478 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AC125611.2-201ENST00000551907 647 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 RPL23AP84-201ENST00000571193 464 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 MIR3158-1-201ENST00000583596 81 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AC021171.1-201ENST00000603137 706 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AL450489.1-201ENST00000612071 468 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AL392088.2-201ENST00000637607 285 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 AC011460.1-201ENST00000636268 1834 ntBASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
BLOC1S4Q9NUP1 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms