Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 RNU6-343P-201ENST00000364709 104 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 U3.42-201ENST00000408746 214 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 RN7SKP159-201ENST00000410657 292 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 AL022400.1-201ENST00000423946 935 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 UBE2D3P2-201ENST00000424409 445 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 AC234781.2-201ENST00000426370 994 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 RPL36AP33-201ENST00000450395 310 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 AL136097.1-201ENST00000456945 913 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 RPL30P9-201ENST00000465586 330 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 HSPE1P6-201ENST00000479457 291 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 AC022447.3-201ENST00000506865 495 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 GMPSP1-201ENST00000514075 579 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 SNORA31.1-201ENST00000515993 133 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 SNORA31.5-201ENST00000516190 133 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 RN7SKP265-201ENST00000516448 223 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 AP003461.1-201ENST00000528866 78 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 UBE2NP1-201ENST00000545592 458 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 MTND1P24-201ENST00000552175 861 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 AL121772.2-201ENST00000614331 297 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 AC018816.2-201ENST00000621460 353 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 AL356863.1-201ENST00000623378 1080 ntBASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NHLRC1Q6VVB1 AC110774.1-201ENST00000623567 2018 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 AC007656.2-201ENST00000624902 4547 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 RPL21P132-201ENST00000331267 462 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 AL672167.1-206ENST00000356293 943 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 RNU6-853P-201ENST00000364306 107 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 RNU1-101P-201ENST00000391171 127 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 RNU6-1197P-201ENST00000391183 107 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 U3.39-201ENST00000408569 239 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 HMGN1P24-201ENST00000412282 298 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 SYF2P2-201ENST00000417620 583 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 XKRYP1-201ENST00000423438 492 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 USP9YP36-201ENST00000424581 829 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 ARF4P2-201ENST00000430209 526 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 OR4K11P-201ENST00000431829 904 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 XKRYP2-201ENST00000432915 492 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 UBE2FP3-201ENST00000436366 524 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 YWHAZP7-201ENST00000436906 631 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 MTCO1P27-201ENST00000448269 226 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 HMGB3P8-201ENST00000449709 577 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 AL109741.2-201ENST00000455561 343 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 AL139824.2-201ENST00000458731 1095 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 AC034236.1-201ENST00000469891 373 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 RPS3AP50-201ENST00000487064 803 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 AC023632.4-201ENST00000517783 191 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 AC090888.2-201ENST00000559765 1144 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 AC002400.1-201ENST00000569310 726 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 MIR3186-201ENST00000577404 85 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 MIR4429-201ENST00000580105 73 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 AC006077.1-201ENST00000604746 343 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 AC119674.1-207ENST00000641355 633 ntBASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NHLRC1Q6VVB1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.89
NHLRC1Q6VVB1 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
NHLRC1Q6VVB1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.21□□□□□ -1.89
NHLRC1Q6VVB1 AL161912.2-201ENST00000565707 3007 ntBASIC3.21□□□□□ -1.9
NHLRC1Q6VVB1 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NHLRC1Q6VVB1 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NHLRC1Q6VVB1 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
NHLRC1Q6VVB1 RNA5SP88-201ENST00000365560 109 ntBASIC3.21□□□□□ -1.9
NHLRC1Q6VVB1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
NHLRC1Q6VVB1 RNU6-432P-201ENST00000384196 109 ntBASIC3.21□□□□□ -1.9
NHLRC1Q6VVB1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms