Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL6Q6ICC9 snoU13.8-201ENST00000458890 104 ntBASIC3.11□□□□□ -1.91
RTL6Q6ICC9 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL6Q6ICC9 AC092754.2-201ENST00000463506 460 ntBASIC3.11□□□□□ -1.91
RTL6Q6ICC9 RN7SL807P-201ENST00000470923 297 ntBASIC3.11□□□□□ -1.91
RTL6Q6ICC9 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.11□□□□□ -1.91
RTL6Q6ICC9 CBX3P3-201ENST00000508108 532 ntBASIC3.11□□□□□ -1.91
RTL6Q6ICC9 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL6Q6ICC9 TXNP6-201ENST00000510190 310 ntBASIC3.11□□□□□ -1.91
RTL6Q6ICC9 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.11□□□□□ -1.91
RTL6Q6ICC9 RNU1-61P-201ENST00000516107 151 ntBASIC3.11□□□□□ -1.91
RTL6Q6ICC9 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.11□□□□□ -1.91
RTL6Q6ICC9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL6Q6ICC9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL6Q6ICC9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL6Q6ICC9 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.11□□□□□ -1.91
RTL6Q6ICC9 AC234772.3-201ENST00000602277 528 ntBASIC3.11□□□□□ -1.91
RTL6Q6ICC9 AL160281.1-201ENST00000605307 311 ntBASIC3.11□□□□□ -1.91
RTL6Q6ICC9 AC106028.5-201ENST00000610332 395 ntBASIC3.11□□□□□ -1.91
RTL6Q6ICC9 VIS1.1-201ENST00000610517 203 ntBASIC3.11□□□□□ -1.91
RTL6Q6ICC9 AC011330.2-201ENST00000621680 635 ntBASIC3.11□□□□□ -1.91
RTL6Q6ICC9 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RTL6Q6ICC9 AC009812.4-201ENST00000569134 1805 ntBASIC3.11□□□□□ -1.91
RTL6Q6ICC9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.11□□□□□ -1.91
RTL6Q6ICC9 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.11□□□□□ -1.91
RTL6Q6ICC9 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RTL6Q6ICC9 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
RTL6Q6ICC9 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 RNU1-75P-201ENST00000347264 129 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 RNU6-931P-201ENST00000363850 107 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 RNU6-173P-201ENST00000364215 104 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 RNA5SP42-201ENST00000364278 115 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 EI24P2-201ENST00000397776 1076 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 U3.39-201ENST00000408569 239 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 RNU2-43P-201ENST00000410306 190 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 RNU4-65P-201ENST00000410473 140 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 CYCSP32-201ENST00000440548 321 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 OR6K5P-201ENST00000447050 945 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 HMGB3P8-201ENST00000449709 577 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 ANKRD26P4-201ENST00000455755 950 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 RPL30P9-201ENST00000465586 330 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AC023598.1-201ENST00000472521 361 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 RPL7P23-201ENST00000493874 747 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AC147055.4-201ENST00000504399 745 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AC024589.1-201ENST00000512207 263 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 RNU6-528P-201ENST00000516926 100 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AC009097.3-201ENST00000563557 1018 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 YPEL5P2-201ENST00000605553 359 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AC002546.1-201ENST00000588041 2504 ntBASIC3.1□□□□□ -1.91
RTL6Q6ICC9 AC032011.1-201ENST00000611703 1549 ntBASIC3.09□□□□□ -1.91
RTL6Q6ICC9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RTL6Q6ICC9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
RTL6Q6ICC9 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RTL6Q6ICC9 AL161781.1-201ENST00000354277 403 ntBASIC3.09□□□□□ -1.91
RTL6Q6ICC9 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RTL6Q6ICC9 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RTL6Q6ICC9 U3.42-201ENST00000408746 214 ntBASIC3.09□□□□□ -1.91
RTL6Q6ICC9 BX119904.4-201ENST00000424402 301 ntBASIC3.09□□□□□ -1.91
RTL6Q6ICC9 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.09□□□□□ -1.91
RTL6Q6ICC9 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.09□□□□□ -1.91
RTL6Q6ICC9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.09□□□□□ -1.91
RTL6Q6ICC9 AC024082.2-201ENST00000434771 238 ntBASIC3.09□□□□□ -1.91
RTL6Q6ICC9 SNRPEP7-201ENST00000438350 220 ntBASIC3.09□□□□□ -1.91
RTL6Q6ICC9 SSXP4-201ENST00000451349 245 ntBASIC3.09□□□□□ -1.91
RTL6Q6ICC9 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.09□□□□□ -1.91
RTL6Q6ICC9 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.09□□□□□ -1.91
RTL6Q6ICC9 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.09□□□□□ -1.91
RTL6Q6ICC9 SNORD121B-201ENST00000458838 81 ntBASIC3.09□□□□□ -1.91
RTL6Q6ICC9 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.09□□□□□ -1.91
RTL6Q6ICC9 RPL23AP67-201ENST00000465341 474 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms