Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HCFC2Q9Y5Z7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HCFC2Q9Y5Z7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HCFC2Q9Y5Z7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HCFC2Q9Y5Z7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HCFC2Q9Y5Z7 GPAT2P1-201ENST00000444924 1672 ntBASIC20.03■□□□□ 0.8
HCFC2Q9Y5Z7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HCFC2Q9Y5Z7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 BX276092.5-203ENST00000456199 560 ntBASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 AL121672.3-201ENST00000608644 468 ntBASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 AC024243.1-201ENST00000609234 778 ntBASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 AC016734.2-201ENST00000624325 1377 ntBASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.02■□□□□ 0.8
HCFC2Q9Y5Z7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HCFC2Q9Y5Z7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HCFC2Q9Y5Z7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
HCFC2Q9Y5Z7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HCFC2Q9Y5Z7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
HCFC2Q9Y5Z7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.02■□□□□ 0.79
HCFC2Q9Y5Z7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
HCFC2Q9Y5Z7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 MIR3180-1-201ENST00000580374 94 ntBASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 MIR3180-3-201ENST00000584616 94 ntBASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HCFC2Q9Y5Z7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 AP002383.4-201ENST00000442518 975 ntBASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 AC111152.3-201ENST00000569699 673 ntBASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 AC036111.1-201ENST00000533973 1582 ntBASIC20■□□□□ 0.79
HCFC2Q9Y5Z7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HCFC2Q9Y5Z7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HCFC2Q9Y5Z7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HCFC2Q9Y5Z7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HCFC2Q9Y5Z7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HCFC2Q9Y5Z7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HCFC2Q9Y5Z7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HCFC2Q9Y5Z7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HCFC2Q9Y5Z7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
HCFC2Q9Y5Z7 AL845331.1-201ENST00000424978 1190 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms