Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 PCDHAC2-203ENST00000615316 3011 ntBASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 FAM197Y1-201ENST00000421178 764 ntBASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 AC145285.6-201ENST00000604632 637 ntBASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA4Q9Y5G9 AC005332.8-201ENST00000622750 2735 ntBASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 AL139384.1-201ENST00000612143 3047 ntBASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 AC005363.2-201ENST00000618631 242 ntBASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 AL032819.2-201ENST00000624543 2162 ntBASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA4Q9Y5G9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 AC098818.2-201ENST00000564925 2320 ntBASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA4Q9Y5G9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 NBPF21P-201ENST00000425093 1451 ntBASIC18.85■□□□□ 0.61
PCDHGA4Q9Y5G9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms