Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC4Q9Y5F7 SLC25A1P4-201ENST00000567977 778 ntBASIC19.34■□□□□ 0.69
PCDHGC4Q9Y5F7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHGC4Q9Y5F7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC4Q9Y5F7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC4Q9Y5F7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PCDHGC4Q9Y5F7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC4Q9Y5F7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC4Q9Y5F7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC4Q9Y5F7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PCDHGC4Q9Y5F7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHGC4Q9Y5F7 KRT8P11-201ENST00000409686 1436 ntBASIC19.34■□□□□ 0.69
PCDHGC4Q9Y5F7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC4Q9Y5F7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.33■□□□□ 0.69
PCDHGC4Q9Y5F7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGC4Q9Y5F7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGC4Q9Y5F7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.33■□□□□ 0.69
PCDHGC4Q9Y5F7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.33■□□□□ 0.69
PCDHGC4Q9Y5F7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGC4Q9Y5F7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
PCDHGC4Q9Y5F7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGC4Q9Y5F7 TSPY23P-201ENST00000440136 739 ntBASIC19.33■□□□□ 0.68
PCDHGC4Q9Y5F7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGC4Q9Y5F7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGC4Q9Y5F7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGC4Q9Y5F7 AC097488.1-201ENST00000507834 756 ntBASIC19.33■□□□□ 0.68
PCDHGC4Q9Y5F7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGC4Q9Y5F7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGC4Q9Y5F7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGC4Q9Y5F7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDHGC4Q9Y5F7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PCDHGC4Q9Y5F7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGC4Q9Y5F7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGC4Q9Y5F7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGC4Q9Y5F7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PCDHGC4Q9Y5F7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGC4Q9Y5F7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGC4Q9Y5F7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC4Q9Y5F7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGC4Q9Y5F7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDHGC4Q9Y5F7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGC4Q9Y5F7 AL390955.1-201ENST00000428694 934 ntBASIC19.32■□□□□ 0.68
PCDHGC4Q9Y5F7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC4Q9Y5F7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGC4Q9Y5F7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
PCDHGC4Q9Y5F7 DGCR10-201ENST00000609839 495 ntBASIC19.32■□□□□ 0.68
PCDHGC4Q9Y5F7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHGC4Q9Y5F7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC4Q9Y5F7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC4Q9Y5F7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PCDHGC4Q9Y5F7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHGC4Q9Y5F7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC4Q9Y5F7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGC4Q9Y5F7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGC4Q9Y5F7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 AC141586.3-201ENST00000562166 1838 ntBASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 MIR1238-201ENST00000408483 83 ntBASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 CRYGFP-201ENST00000418459 633 ntBASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGC4Q9Y5F7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDHGC4Q9Y5F7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGC4Q9Y5F7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGC4Q9Y5F7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.3■□□□□ 0.68
PCDHGC4Q9Y5F7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGC4Q9Y5F7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGC4Q9Y5F7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGC4Q9Y5F7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGC4Q9Y5F7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGC4Q9Y5F7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms