Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC29.59■■■□□ 2.33
CDK11AQ9UQ88 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC29.59■■■□□ 2.33
CDK11AQ9UQ88 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CDK11AQ9UQ88 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC29.59■■■□□ 2.33
CDK11AQ9UQ88 USP48-205ENST00000421625 2818 ntTSL 2 BASIC29.59■■■□□ 2.33
CDK11AQ9UQ88 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
CDK11AQ9UQ88 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CDK11AQ9UQ88 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
CDK11AQ9UQ88 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
CDK11AQ9UQ88 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
CDK11AQ9UQ88 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC29.59■■■□□ 2.33
CDK11AQ9UQ88 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
CDK11AQ9UQ88 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CDK11AQ9UQ88 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC29.58■■■□□ 2.33
CDK11AQ9UQ88 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC29.58■■■□□ 2.33
CDK11AQ9UQ88 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC29.58■■■□□ 2.33
CDK11AQ9UQ88 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC29.58■■■□□ 2.33
CDK11AQ9UQ88 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC29.58■■■□□ 2.33
CDK11AQ9UQ88 AC012313.10-201ENST00000623509 926 ntBASIC29.58■■■□□ 2.33
CDK11AQ9UQ88 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CDK11AQ9UQ88 AL391422.3-201ENST00000603791 2761 ntBASIC29.58■■■□□ 2.33
CDK11AQ9UQ88 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CDK11AQ9UQ88 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CDK11AQ9UQ88 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
CDK11AQ9UQ88 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC29.57■■■□□ 2.32
CDK11AQ9UQ88 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CDK11AQ9UQ88 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
CDK11AQ9UQ88 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC29.57■■■□□ 2.32
CDK11AQ9UQ88 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC29.57■■■□□ 2.32
CDK11AQ9UQ88 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
CDK11AQ9UQ88 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CDK11AQ9UQ88 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CDK11AQ9UQ88 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC29.57■■■□□ 2.32
CDK11AQ9UQ88 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CDK11AQ9UQ88 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
CDK11AQ9UQ88 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC29.56■■■□□ 2.32
CDK11AQ9UQ88 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
CDK11AQ9UQ88 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CDK11AQ9UQ88 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CDK11AQ9UQ88 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC29.56■■■□□ 2.32
CDK11AQ9UQ88 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
CDK11AQ9UQ88 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC29.56■■■□□ 2.32
CDK11AQ9UQ88 AC092119.3-201ENST00000612618 583 ntBASIC29.56■■■□□ 2.32
CDK11AQ9UQ88 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
CDK11AQ9UQ88 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
CDK11AQ9UQ88 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CDK11AQ9UQ88 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CDK11AQ9UQ88 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CDK11AQ9UQ88 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
CDK11AQ9UQ88 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC29.55■■■□□ 2.32
CDK11AQ9UQ88 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CDK11AQ9UQ88 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CDK11AQ9UQ88 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CDK11AQ9UQ88 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CDK11AQ9UQ88 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CDK11AQ9UQ88 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CDK11AQ9UQ88 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC29.55■■■□□ 2.32
CDK11AQ9UQ88 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
CDK11AQ9UQ88 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC29.55■■■□□ 2.32
CDK11AQ9UQ88 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC29.55■■■□□ 2.32
CDK11AQ9UQ88 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CDK11AQ9UQ88 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CDK11AQ9UQ88 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CDK11AQ9UQ88 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC29.54■■■□□ 2.32
CDK11AQ9UQ88 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CDK11AQ9UQ88 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
CDK11AQ9UQ88 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CDK11AQ9UQ88 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CDK11AQ9UQ88 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC29.54■■■□□ 2.32
CDK11AQ9UQ88 AL023284.2-201ENST00000405850 579 ntBASIC29.54■■■□□ 2.32
CDK11AQ9UQ88 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC29.54■■■□□ 2.32
CDK11AQ9UQ88 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC29.54■■■□□ 2.32
CDK11AQ9UQ88 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC29.54■■■□□ 2.32
CDK11AQ9UQ88 AC011498.5-201ENST00000592027 486 ntBASIC29.54■■■□□ 2.32
CDK11AQ9UQ88 AC024243.1-201ENST00000609234 778 ntBASIC29.54■■■□□ 2.32
CDK11AQ9UQ88 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC29.54■■■□□ 2.32
CDK11AQ9UQ88 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC29.53■■■□□ 2.32
CDK11AQ9UQ88 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
CDK11AQ9UQ88 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC29.53■■■□□ 2.32
CDK11AQ9UQ88 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CDK11AQ9UQ88 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC29.53■■■□□ 2.32
CDK11AQ9UQ88 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CDK11AQ9UQ88 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CDK11AQ9UQ88 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC29.53■■■□□ 2.32
CDK11AQ9UQ88 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CDK11AQ9UQ88 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CDK11AQ9UQ88 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC29.53■■■□□ 2.32
CDK11AQ9UQ88 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC29.53■■■□□ 2.32
CDK11AQ9UQ88 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
CDK11AQ9UQ88 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
CDK11AQ9UQ88 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CDK11AQ9UQ88 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CDK11AQ9UQ88 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CDK11AQ9UQ88 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms