Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SPASTQ9UBP0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPASTQ9UBP0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SPASTQ9UBP0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SPASTQ9UBP0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SPASTQ9UBP0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.05■□□□□ 0.64
SPASTQ9UBP0 ATP5G1P1-201ENST00000448724 379 ntBASIC19.05■□□□□ 0.64
SPASTQ9UBP0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.05■□□□□ 0.64
SPASTQ9UBP0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.05■□□□□ 0.64
SPASTQ9UBP0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SPASTQ9UBP0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
SPASTQ9UBP0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
SPASTQ9UBP0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SPASTQ9UBP0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPASTQ9UBP0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SPASTQ9UBP0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPASTQ9UBP0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SPASTQ9UBP0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPASTQ9UBP0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.04■□□□□ 0.64
SPASTQ9UBP0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SPASTQ9UBP0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SPASTQ9UBP0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPASTQ9UBP0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.04■□□□□ 0.64
SPASTQ9UBP0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.04■□□□□ 0.64
SPASTQ9UBP0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPASTQ9UBP0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SPASTQ9UBP0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.04■□□□□ 0.64
SPASTQ9UBP0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.04■□□□□ 0.64
SPASTQ9UBP0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.04■□□□□ 0.64
SPASTQ9UBP0 KRT18P35-201ENST00000510488 1269 ntBASIC19.04■□□□□ 0.64
SPASTQ9UBP0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.04■□□□□ 0.64
SPASTQ9UBP0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.04■□□□□ 0.64
SPASTQ9UBP0 AC073508.3-201ENST00000619697 1419 ntBASIC19.04■□□□□ 0.64
SPASTQ9UBP0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SPASTQ9UBP0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
SPASTQ9UBP0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 ARMC10P1-201ENST00000313754 855 ntBASIC19.03■□□□□ 0.64
SPASTQ9UBP0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 MFAP1P1-201ENST00000442257 1255 ntBASIC19.03■□□□□ 0.64
SPASTQ9UBP0 AC008040.2-201ENST00000461049 708 ntBASIC19.03■□□□□ 0.64
SPASTQ9UBP0 ECEL1P2-202ENST00000465689 757 ntBASIC19.03■□□□□ 0.64
SPASTQ9UBP0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 AL160286.2-201ENST00000567150 934 ntBASIC19.03■□□□□ 0.64
SPASTQ9UBP0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 AL691432.2-201ENST00000607222 2038 ntBASIC19.03■□□□□ 0.64
SPASTQ9UBP0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPASTQ9UBP0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 AC096733.2-201ENST00000609937 1394 ntBASIC19.02■□□□□ 0.64
SPASTQ9UBP0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPASTQ9UBP0 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.02■□□□□ 0.63
SPASTQ9UBP0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SPASTQ9UBP0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SPASTQ9UBP0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SPASTQ9UBP0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.02■□□□□ 0.63
SPASTQ9UBP0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms