Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 FAM197Y1-201ENST00000421178 764 ntBASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 AC026271.3-201ENST00000571884 352 ntBASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 AL031985.4-201ENST00000642138 673 ntBASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PPARGC1AQ9UBK2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PPARGC1AQ9UBK2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 AC004408.2-201ENST00000623613 2777 ntBASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 TNXA-203ENST00000507684 2038 ntBASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 MIR4497-201ENST00000583208 89 ntBASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PPARGC1AQ9UBK2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
PPARGC1AQ9UBK2 AC120498.9-201ENST00000339021 3867 ntBASIC19.89■□□□□ 0.78
PPARGC1AQ9UBK2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms