Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 C1QBPP2-201ENST00000528754 825 ntBASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 AL023875.1-201ENST00000640777 796 ntBASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 PKD1P1-201ENST00000458669 6805 ntBASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 MIR4651-201ENST00000582622 73 ntBASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 AC124016.1-201ENST00000609552 612 ntBASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC00474Q9P2X8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 UBE2SP1-201ENST00000450587 669 ntBASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 AP006294.2-201ENST00000641667 209 ntBASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00474Q9P2X8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00474Q9P2X8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00474Q9P2X8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
LINC00474Q9P2X8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00474Q9P2X8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms