Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHD7Q9P2D1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.33■□□□□ 0.85
CHD7Q9P2D1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHD7Q9P2D1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.33■□□□□ 0.85
CHD7Q9P2D1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHD7Q9P2D1 TSPY22P-201ENST00000427496 604 ntBASIC20.33■□□□□ 0.85
CHD7Q9P2D1 AL121912.1-201ENST00000603683 238 ntBASIC20.33■□□□□ 0.85
CHD7Q9P2D1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.33■□□□□ 0.85
CHD7Q9P2D1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHD7Q9P2D1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHD7Q9P2D1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHD7Q9P2D1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHD7Q9P2D1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CHD7Q9P2D1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CHD7Q9P2D1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.33■□□□□ 0.84
CHD7Q9P2D1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CHD7Q9P2D1 FOSL1P1-201ENST00000511041 816 ntBASIC20.33■□□□□ 0.84
CHD7Q9P2D1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.33■□□□□ 0.84
CHD7Q9P2D1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CHD7Q9P2D1 AC024243.1-201ENST00000609234 778 ntBASIC20.33■□□□□ 0.84
CHD7Q9P2D1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD7Q9P2D1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD7Q9P2D1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD7Q9P2D1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD7Q9P2D1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CHD7Q9P2D1 TOB2P1-201ENST00000469761 992 ntBASIC20.32■□□□□ 0.84
CHD7Q9P2D1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.32■□□□□ 0.84
CHD7Q9P2D1 REXO1L6P-202ENST00000619970 1078 ntBASIC20.32■□□□□ 0.84
CHD7Q9P2D1 AF228730.7-201ENST00000641842 219 ntBASIC20.32■□□□□ 0.84
CHD7Q9P2D1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD7Q9P2D1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.32■□□□□ 0.84
CHD7Q9P2D1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD7Q9P2D1 AP000867.3-201ENST00000524675 377 ntBASIC20.32■□□□□ 0.84
CHD7Q9P2D1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.32■□□□□ 0.84
CHD7Q9P2D1 AC117500.6-201ENST00000624871 588 ntBASIC20.32■□□□□ 0.84
CHD7Q9P2D1 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 SAPCD2P3-201ENST00000455031 850 ntBASIC20.31■□□□□ 0.84
CHD7Q9P2D1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 AP005901.3-202ENST00000581653 237 ntBASIC20.31■□□□□ 0.84
CHD7Q9P2D1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD7Q9P2D1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD7Q9P2D1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CHD7Q9P2D1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.3■□□□□ 0.84
CHD7Q9P2D1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CHD7Q9P2D1 MIR662-201ENST00000384847 95 ntBASIC20.3■□□□□ 0.84
CHD7Q9P2D1 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.3■□□□□ 0.84
CHD7Q9P2D1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.3■□□□□ 0.84
CHD7Q9P2D1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD7Q9P2D1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.3■□□□□ 0.84
CHD7Q9P2D1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD7Q9P2D1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD7Q9P2D1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.3■□□□□ 0.84
CHD7Q9P2D1 AC079602.3-201ENST00000623931 403 ntBASIC20.3■□□□□ 0.84
CHD7Q9P2D1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.3■□□□□ 0.84
CHD7Q9P2D1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.3■□□□□ 0.84
CHD7Q9P2D1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD7Q9P2D1 AL590627.1-203ENST00000421194 1026 ntBASIC20.29■□□□□ 0.84
CHD7Q9P2D1 RNF126P1-202ENST00000569893 925 ntBASIC20.29■□□□□ 0.84
CHD7Q9P2D1 AC138894.3-201ENST00000603787 634 ntBASIC20.29■□□□□ 0.84
CHD7Q9P2D1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.29■□□□□ 0.84
CHD7Q9P2D1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD7Q9P2D1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD7Q9P2D1 AC092667.1-201ENST00000434301 2586 ntBASIC20.29■□□□□ 0.84
CHD7Q9P2D1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD7Q9P2D1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHD7Q9P2D1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHD7Q9P2D1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD7Q9P2D1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CHD7Q9P2D1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.29■□□□□ 0.84
CHD7Q9P2D1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHD7Q9P2D1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.29■□□□□ 0.84
CHD7Q9P2D1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.29■□□□□ 0.84
CHD7Q9P2D1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD7Q9P2D1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CHD7Q9P2D1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms