Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TREM2Q9NZC2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.53■□□□□ 0.24
TREM2Q9NZC2 CR392000.1-201ENST00000624770 1228 ntBASIC16.53■□□□□ 0.24
TREM2Q9NZC2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TREM2Q9NZC2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TREM2Q9NZC2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.53■□□□□ 0.24
TREM2Q9NZC2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TREM2Q9NZC2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TREM2Q9NZC2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TREM2Q9NZC2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TREM2Q9NZC2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TREM2Q9NZC2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TREM2Q9NZC2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TREM2Q9NZC2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TREM2Q9NZC2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TREM2Q9NZC2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TREM2Q9NZC2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TREM2Q9NZC2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TREM2Q9NZC2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TREM2Q9NZC2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TREM2Q9NZC2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TREM2Q9NZC2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TREM2Q9NZC2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.52■□□□□ 0.23
TREM2Q9NZC2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TREM2Q9NZC2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TREM2Q9NZC2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TREM2Q9NZC2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TREM2Q9NZC2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TREM2Q9NZC2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.52■□□□□ 0.23
TREM2Q9NZC2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.52■□□□□ 0.23
TREM2Q9NZC2 AC005082.1-201ENST00000413042 2259 ntBASIC16.52■□□□□ 0.23
TREM2Q9NZC2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TREM2Q9NZC2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TREM2Q9NZC2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 AL355355.2-201ENST00000442321 338 ntBASIC16.51■□□□□ 0.23
TREM2Q9NZC2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 KRT18P16-201ENST00000510337 1294 ntBASIC16.51■□□□□ 0.23
TREM2Q9NZC2 CD177P1-201ENST00000606252 935 ntBASIC16.51■□□□□ 0.23
TREM2Q9NZC2 AC026471.5-201ENST00000615068 467 ntBASIC16.51■□□□□ 0.23
TREM2Q9NZC2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TREM2Q9NZC2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.5■□□□□ 0.23
TREM2Q9NZC2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TREM2Q9NZC2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.5■□□□□ 0.23
TREM2Q9NZC2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.5■□□□□ 0.23
TREM2Q9NZC2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TREM2Q9NZC2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms