Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 SPDYE13P-201ENST00000445314 798 ntBASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 GPAT2P1-201ENST00000444924 1672 ntBASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HCFC1R1Q9NWW0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.88■□□□□ 0.77
HCFC1R1Q9NWW0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 AC092597.1-201ENST00000487352 616 ntBASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 CLEC4GP1-201ENST00000596555 870 ntBASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1R1Q9NWW0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.86■□□□□ 0.77
HCFC1R1Q9NWW0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms