Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.2■□□□□ 0.82
GDF3Q9NR23 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.2■□□□□ 0.82
GDF3Q9NR23 AC233263.1-201ENST00000578059 224 ntBASIC20.2■□□□□ 0.82
GDF3Q9NR23 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.2■□□□□ 0.82
GDF3Q9NR23 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GDF3Q9NR23 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDF3Q9NR23 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.2■□□□□ 0.82
GDF3Q9NR23 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDF3Q9NR23 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDF3Q9NR23 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.2■□□□□ 0.82
GDF3Q9NR23 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDF3Q9NR23 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDF3Q9NR23 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDF3Q9NR23 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
GDF3Q9NR23 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.19■□□□□ 0.82
GDF3Q9NR23 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.19■□□□□ 0.82
GDF3Q9NR23 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.19■□□□□ 0.82
GDF3Q9NR23 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
GDF3Q9NR23 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDF3Q9NR23 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
GDF3Q9NR23 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.19■□□□□ 0.82
GDF3Q9NR23 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDF3Q9NR23 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GDF3Q9NR23 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.19■□□□□ 0.82
GDF3Q9NR23 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.19■□□□□ 0.82
GDF3Q9NR23 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GDF3Q9NR23 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDF3Q9NR23 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDF3Q9NR23 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.19■□□□□ 0.82
GDF3Q9NR23 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GDF3Q9NR23 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
GDF3Q9NR23 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDF3Q9NR23 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.19■□□□□ 0.82
GDF3Q9NR23 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDF3Q9NR23 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.19■□□□□ 0.82
GDF3Q9NR23 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF3Q9NR23 Z98044.1-201ENST00000632503 1764 ntBASIC20.18■□□□□ 0.82
GDF3Q9NR23 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.18■□□□□ 0.82
GDF3Q9NR23 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF3Q9NR23 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.18■□□□□ 0.82
GDF3Q9NR23 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
GDF3Q9NR23 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GDF3Q9NR23 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
GDF3Q9NR23 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF3Q9NR23 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF3Q9NR23 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
GDF3Q9NR23 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
GDF3Q9NR23 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GDF3Q9NR23 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF3Q9NR23 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.18■□□□□ 0.82
GDF3Q9NR23 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GDF3Q9NR23 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF3Q9NR23 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GDF3Q9NR23 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.18■□□□□ 0.82
GDF3Q9NR23 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.18■□□□□ 0.82
GDF3Q9NR23 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.18■□□□□ 0.82
GDF3Q9NR23 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GDF3Q9NR23 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GDF3Q9NR23 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.18■□□□□ 0.82
GDF3Q9NR23 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF3Q9NR23 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.18■□□□□ 0.82
GDF3Q9NR23 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF3Q9NR23 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF3Q9NR23 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.18■□□□□ 0.82
GDF3Q9NR23 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
GDF3Q9NR23 AL354751.1-201ENST00000412768 1863 ntBASIC20.18■□□□□ 0.82
GDF3Q9NR23 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
GDF3Q9NR23 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDF3Q9NR23 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDF3Q9NR23 AL133373.2-201ENST00000623187 2828 ntBASIC20.17■□□□□ 0.82
GDF3Q9NR23 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDF3Q9NR23 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.17■□□□□ 0.82
GDF3Q9NR23 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.17■□□□□ 0.82
GDF3Q9NR23 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
GDF3Q9NR23 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
GDF3Q9NR23 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GDF3Q9NR23 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GDF3Q9NR23 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDF3Q9NR23 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDF3Q9NR23 HLA-G-202ENST00000376815 851 ntBASIC20.17■□□□□ 0.82
GDF3Q9NR23 HLA-G-203ENST00000376818 1127 ntBASIC20.17■□□□□ 0.82
GDF3Q9NR23 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.17■□□□□ 0.82
GDF3Q9NR23 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.17■□□□□ 0.82
GDF3Q9NR23 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.17■□□□□ 0.82
GDF3Q9NR23 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
GDF3Q9NR23 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.17■□□□□ 0.82
GDF3Q9NR23 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
GDF3Q9NR23 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.17■□□□□ 0.82
GDF3Q9NR23 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GDF3Q9NR23 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.17■□□□□ 0.82
GDF3Q9NR23 FP475955.4-201ENST00000623131 1990 ntBASIC20.17■□□□□ 0.82
GDF3Q9NR23 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GDF3Q9NR23 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDF3Q9NR23 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDF3Q9NR23 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.17■□□□□ 0.82
GDF3Q9NR23 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.17■□□□□ 0.82
GDF3Q9NR23 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF3Q9NR23 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF3Q9NR23 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF3Q9NR23 AC018470.1-201ENST00000624790 3129 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms