Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
UPF2Q9HAU5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
UPF2Q9HAU5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
UPF2Q9HAU5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
UPF2Q9HAU5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
UPF2Q9HAU5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
UPF2Q9HAU5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
UPF2Q9HAU5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
UPF2Q9HAU5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
UPF2Q9HAU5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.48■■□□□ 1.35
UPF2Q9HAU5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.48■■□□□ 1.35
UPF2Q9HAU5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.48■■□□□ 1.35
UPF2Q9HAU5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC23.48■■□□□ 1.35
UPF2Q9HAU5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
UPF2Q9HAU5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
UPF2Q9HAU5 KRT17P1-201ENST00000399211 1546 ntBASIC23.48■■□□□ 1.35
UPF2Q9HAU5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
UPF2Q9HAU5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
UPF2Q9HAU5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
UPF2Q9HAU5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
UPF2Q9HAU5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
UPF2Q9HAU5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC23.47■■□□□ 1.35
UPF2Q9HAU5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
UPF2Q9HAU5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
UPF2Q9HAU5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
UPF2Q9HAU5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
UPF2Q9HAU5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
UPF2Q9HAU5 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.47■■□□□ 1.35
UPF2Q9HAU5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.47■■□□□ 1.35
UPF2Q9HAU5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.47■■□□□ 1.35
UPF2Q9HAU5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
UPF2Q9HAU5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
UPF2Q9HAU5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
UPF2Q9HAU5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC23.47■■□□□ 1.35
UPF2Q9HAU5 AL512353.2-201ENST00000448759 1962 ntBASIC23.47■■□□□ 1.35
UPF2Q9HAU5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
UPF2Q9HAU5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
UPF2Q9HAU5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
UPF2Q9HAU5 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
UPF2Q9HAU5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
UPF2Q9HAU5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
UPF2Q9HAU5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC23.46■■□□□ 1.35
UPF2Q9HAU5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC23.46■■□□□ 1.35
UPF2Q9HAU5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
UPF2Q9HAU5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.46■■□□□ 1.35
UPF2Q9HAU5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
UPF2Q9HAU5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
UPF2Q9HAU5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC23.46■■□□□ 1.35
UPF2Q9HAU5 AC231657.2-201ENST00000624556 255 ntBASIC23.46■■□□□ 1.35
UPF2Q9HAU5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC23.46■■□□□ 1.35
UPF2Q9HAU5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
UPF2Q9HAU5 AC005332.8-201ENST00000622750 2735 ntBASIC23.46■■□□□ 1.35
UPF2Q9HAU5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
UPF2Q9HAU5 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.45■■□□□ 1.35
UPF2Q9HAU5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC23.45■■□□□ 1.34
UPF2Q9HAU5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC23.45■■□□□ 1.34
UPF2Q9HAU5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
UPF2Q9HAU5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.45■■□□□ 1.34
UPF2Q9HAU5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
UPF2Q9HAU5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
UPF2Q9HAU5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.45■■□□□ 1.34
UPF2Q9HAU5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.45■■□□□ 1.34
UPF2Q9HAU5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
UPF2Q9HAU5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.45■■□□□ 1.34
UPF2Q9HAU5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
UPF2Q9HAU5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.45■■□□□ 1.34
UPF2Q9HAU5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms